Ecosyste.ms: Repos
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GitHub topics: capture-recapture-models
oliviergimenez/sir_multievent
Contains functions to simulate data from and fit SIR multievent models
Language: R - Size: 26.4 KB - Last synced: 2 months ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 1
oliviergimenez/R2ucare
R package to perform goodness-of-fit tests for capture-recapture models (and various manipulations)
Language: R - Size: 2.83 MB - Last synced: 2 months ago - Pushed: almost 2 years ago - Stars: 6 - Forks: 5
oliviergimenez/p2cr
Fit principal component capture-recapture model to snow petrel data
Size: 2.83 MB - Last synced: 2 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0
oliviergimenez/NETDEM-workshop-survival-nimble
This repository holds the source materials used for a working group/symposium on capture-recapture models and social networks, and an introduction to capture-recapture models in nimble to estimate demographic parameters.
Language: HTML - Size: 136 MB - Last synced: 2 months ago - Pushed: over 1 year ago - Stars: 2 - Forks: 0
oliviergimenez/multistate_local_minima
Illustrate solutions to avoid local minima in multistate capture-recapture models
Language: HTML - Size: 3.03 MB - Last synced: 2 months ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0
oliviergimenez/hmm-cr-nimble-isec2022-workshop
material for a workshop on Bayesian capture-recapture inference with hidden Markov models in Nimble
Language: HTML - Size: 157 MB - Last synced: 2 months ago - Pushed: almost 2 years ago - Stars: 3 - Forks: 0
oliviergimenez/estim_fitness
R and Jags codes to estimate fitness using capture-recapture data
Language: R - Size: 2.21 MB - Last synced: 2 months ago - Pushed: almost 6 years ago - Stars: 2 - Forks: 0
oliviergimenez/bayesian-cr-workshop
Material for a workshop on Bayesian analysis of capture-recapture data with hidden Markov models and Nimble
Language: HTML - Size: 359 MB - Last synced: 2 months ago - Pushed: almost 2 years ago - Stars: 12 - Forks: 6
oliviergimenez/abundance_estimation
Estimate abundance using capture-recapture models
Language: HTML - Size: 2.41 MB - Last synced: 2 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 1
smithlabcode/preseq
Software for predicting library complexity and genome coverage in high-throughput sequencing.
Language: C++ - Size: 11.8 MB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 67 - Forks: 15
dilsaddt/mlemur_seasonal_survival_0923
Seasonal survival analysis of the gray mouse lemur population in Kirindy Forest, Madagascar using multistate capture-recapture models.
Language: R - Size: 47.9 KB - Last synced: 5 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 0
oliviergimenez/multievent_jags_R
Fit multievent capture-recapture models in R (maximum-likelihood), Nimble and JAGS (Bayesian)
Language: R - Size: 16.6 KB - Last synced: 2 months ago - Pushed: almost 4 years ago - Stars: 12 - Forks: 1
oliviergimenez/bayesRD
Bayesian implementation of capture-recapture models with robust design
Language: HTML - Size: 499 KB - Last synced: 2 months ago - Pushed: about 4 years ago - Stars: 6 - Forks: 0
oliviergimenez/indhet_in_CRmodels
Illustrate CR models with individual heterogeneity (multistate, random-effect, finite-mixture)
Language: R - Size: 6.52 MB - Last synced: 2 months ago - Pushed: over 7 years ago - Stars: 2 - Forks: 0
oliviergimenez/capture-recapture-review
material for a review on capture-recapture methods and questions
Size: 48.8 MB - Last synced: 2 months ago - Pushed: almost 4 years ago - Stars: 9 - Forks: 0
romunov/secr_resources
Resources that might come handy to anyone using spatially explicit mark-capture-recapture models.
Size: 522 KB - Last synced: 4 months ago - Pushed: almost 5 years ago - Stars: 2 - Forks: 1
