Topic: "bioinformatics-scripts"
HuffordLab/NAM-genomes
Detailed bioinformatics scripts and methods used in the NAM genome paper.
Language: R - Size: 138 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 74 - Forks: 29
widdowquinn/find_differential_primers
Code for design of diagnostic PCR primers, and metabarcoding markers.
Language: Python - Size: 95.8 MB - Last synced at: 20 days ago - Pushed at: over 1 year ago - Stars: 60 - Forks: 25
bystrogenomics/bystro
Bystro genetic analysis (annotation, filtering, statistics)
Language: Python - Size: 73 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 40 - Forks: 13
brianyiktaktsui/Skymap
High-throughput gene to knowledge mapping through massive integration of public sequencing data.
Language: Jupyter Notebook - Size: 23.7 MB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 31 - Forks: 3
fomightez/sequencework
programs and scripts, mainly python, for analyses related to nucleic or protein sequences
Language: Python - Size: 3.74 MB - Last synced at: 9 days ago - Pushed at: 17 days ago - Stars: 24 - Forks: 4
flystar233/pyscript-bio
生物信息学python代码，专注于重测序文本计算、处理
Language: Python - Size: 122 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 24 - Forks: 6
dvklopfenstein/ReactomePy
Explore biomolecular pathways in Reactome from the command-line or a Python script
Language: Python - Size: 17.1 MB - Last synced at: 18 days ago - Pushed at: 6 months ago - Stars: 23 - Forks: 4
vinuesa/TIB-filoinfo
Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México
Language: Shell - Size: 160 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 21 - Forks: 5
robinvanderlee/positive-selection
Scripts and procedures for detecting positively selected genes and codons in primates
Language: Perl - Size: 169 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 19 - Forks: 16
Sydney-Informatics-Hub/Bioinformatics
A suite of bioinformatics data processing and analysis pipelines, software, and training resources for common methods.
Size: 173 KB - Last synced at: about 1 month ago - Pushed at: about 2 months ago - Stars: 17 - Forks: 1
SouthGreenPlatform/GeMo
A mosaic genome painting tool for plant genomes
Language: JavaScript - Size: 8.89 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 15 - Forks: 1
pwwang/biopipen
A set of processes/pipelines for bioinformatics
Language: R - Size: 42.6 MB - Last synced at: 22 days ago - Pushed at: about 1 month ago - Stars: 13 - Forks: 5
alvesrco/pipecov
This project proposes to contribute to fill the knowledge gap about Covid-19SARS-CoV-2 in Brazil and with the global knowledge about the pathogen. The scientific community and governments of other countries are looking for actions along these lines. The United Kingdom recently established a research network for genomic studies of SARS-CoV-2Covid-19 with a contribution of GBP 20 million (https://www.gov.uk/government/news/uk-launches-whole- genome-sequence-alliance-to-map-spread-of-coronavirus).
Language: R - Size: 28.3 MB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 12 - Forks: 8
tomarovsky/Biocrutch
Various bioinformatics scripts
Language: Python - Size: 1.59 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 8 - Forks: 1
johnnytam100/pdb2uniprot
A Python script to map PDB ID + chain ID to UniProt ID.
Language: Python - Size: 15.6 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 8 - Forks: 0
ramsainanduri/split_multi_fasta
Split multi fasta file into single fasta files
Language: Python - Size: 15.6 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 8 - Forks: 8
minesh1291/HowToBioinformatics
:man_scientist: Analysis Pipelines and Useful Tools
Language: R - Size: 8.45 MB - Last synced at: 7 days ago - Pushed at: over 6 years ago - Stars: 8 - Forks: 1
lazappi/binf-scripts
A collection of useful bioinformatics scripts.
Language: Python - Size: 27.3 KB - Last synced at: 7 days ago - Pushed at: over 8 years ago - Stars: 8 - Forks: 7
fomightez/blast-binder
Repo for running command line-based BLAST in Jupyter environment provided via Binder.
Language: Jupyter Notebook - Size: 2.06 MB - Last synced at: 9 days ago - Pushed at: about 1 year ago - Stars: 7 - Forks: 5
peterk87/filter_classified_reads
Filter for reads from taxa of interest using Kraken2/Centrifuge classification results.
Language: Python - Size: 1.53 MB - Last synced at: 10 days ago - Pushed at: over 2 years ago - Stars: 7 - Forks: 1
fomightez/pdbepisa-binder
Using data from PDBePISA with the convenience of Python and Jupyter.
Language: Jupyter Notebook - Size: 1.48 MB - Last synced at: 20 days ago - Pushed at: 5 months ago - Stars: 6 - Forks: 1
fallerlab/Ribo-ODDR
Ribo-seq focused Oligo Design pipeline for experiment-specific Depletion of Ribosomal RNAs
Language: Python - Size: 4.78 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 6 - Forks: 0
amojarro/carrierseq
a sequence analysis workflow for low-input nanopore sequencing
Language: Shell - Size: 1.61 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 1
PlatonB/bioinformatic-python-scripts
Простые биоинформатические скрипты на Python 3. Удобная и гибкая замена Excel/Calc для решения повседневных рутинных задач вычислительной биологии.
Language: Python - Size: 299 KB - Last synced at: 3 days ago - Pushed at: over 5 years ago - Stars: 6 - Forks: 3
ulelab/peka
Find motifs enriched around prominent crosslinks
Language: Python - Size: 31.9 MB - Last synced at: 10 days ago - Pushed at: 12 months ago - Stars: 5 - Forks: 2
mauriceling/bactome
Toolbox for Studying Bacteria, Archaea, and Complex Taxons
Language: HTML - Size: 10.4 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 5 - Forks: 55
orionzhou/maize 📦
bioinformatic utility libraries in python
Language: Python - Size: 998 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 5 - Forks: 2
V-Z/hybseq-scripts
Set of scripts to process HybSeq target enrichment HTS data (on computing grids).
Language: Shell - Size: 2.33 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 4 - Forks: 3
PollyTikhonova/ImGQfinder
The official python version of ImGQfinder: http://imgqfinder.niifhm.ru/ A tool that finds gquadruplexes and imotifs.
Language: Python - Size: 235 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 4 - Forks: 0
surh/pbi
Microbiome analysis for phosphate-defense interaction
Language: R - Size: 149 KB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 4 - Forks: 2
vimalkvn/riboplot 📦
RiboPlot includes programs to plot and output Ribo-Seq read counts from an alignment file (BAM format).
Language: Python - Size: 2.85 MB - Last synced at: 10 days ago - Pushed at: over 6 years ago - Stars: 4 - Forks: 1
cbp44/samflags
Command line utility written in NodeJS to decode SAM flags to explain what they mean.
Language: JavaScript - Size: 7.81 KB - Last synced at: 2 days ago - Pushed at: over 7 years ago - Stars: 4 - Forks: 0
alfonsomiguelcruz/pgc_btip_topone
TopONE is a project that studies recombination events using topological data analysis. This was made in the PGC-BTIP 2024 internship by Alfonso Miguel Cruz and Claire Angelie Gabisay, and mentored by C.J. Palpal-latoc.
Language: Python - Size: 32.7 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 3 - Forks: 0
nmtrang00/Var_Annot_Eval
An empirical variant annotation and data evaluation pipeline.
Language: Python - Size: 43 KB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 1
anand84471/PythonForBioinformatics
This repository will be helpful to start using python for your Bioinformatics projects.
Language: Python - Size: 723 KB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 3 - Forks: 3
gkoulouras/seq-sec-ratio
A console application for the estimation of the primary and secondary structure's elements. Input should be the FASTA-formatted "ss.txt" file generated by PDB database.
Language: Visual Basic - Size: 812 KB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 3 - Forks: 0
fg6/YeastStrainsStudy
Scripts to download the PacBio, ONT and MiSeq datasets used in https://www.nature.com/articles/s41598-017-03996-z and run the pipelines as described in the paper or simply download the final assemblies as generated by the authors.
Language: Shell - Size: 561 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 3 - Forks: 5
ZealousGeneticist/cartoflow
A Python workflow for taking chemicals, finding the genes they interact with, and mapping the communities of genetic interactions.
Language: Python - Size: 63.5 KB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 2 - Forks: 0
Aaryesh-AD/Sequence-cluster-consensus
Scripts for clustering protein sequences, generating consensus sequences that represent a common representative of the cluster, and identifying representative medoid sequences for each cluster as the sequence most representing the cluster.
Language: Jupyter Notebook - Size: 5.48 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 2 - Forks: 0
fomightez/pdbsum-binder
Demonstrating analysis of PDBsum-related data via active Jupyter sessions provided via MyBinder.org
Language: Jupyter Notebook - Size: 140 KB - Last synced at: 9 days ago - Pushed at: 6 months ago - Stars: 2 - Forks: 0
roseedwin/Benchmarking-taxonomic-classifiers-for-soil-shotgun-data
Benchmarking various taxonomic classifiers for profiling soil metagenomic data, with scripts and tools tailored for fungal, bacterial, and archaeal genome identification.
Language: R - Size: 4.23 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 2 - Forks: 0
tgolubch/castanet
Data processing scripts for analysis of targeted metagenomics sequencing data. Intended for use with multiplexed Illumina short-read data generated after enrichment.
Language: Python - Size: 27.3 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 2 - Forks: 1
mrdanieleze/Genomic-Sequence-Comparison-Code-GSCC-
This repository houses the Genomic Sequence Comparison Code (GSCC), a collection of Python scripts designed for genomic sequence analysis. Whether you're comparing suspected sequences with known reference sequences or delving into bioinformatics, GSCC provides versatile tools for pairwise alignment. Feel free to explore!
Language: Python - Size: 26.4 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0
parisepigenetics/rna_feat_ext
Software tools to extract mRNA's features from a list of ENSEMBL gene IDs.
Language: Python - Size: 127 MB - Last synced at: 7 months ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 1
SamiLhll/rbhXpress
A shell script that uses diamond to compute the reciprocal best hits between two proteomes in a rush.
Language: Shell - Size: 12.3 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0
gibbslab/biobash Fork of ampinzonv/biobash
Common BASH routines for computational biology
Language: Shell - Size: 17.6 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 3
wintergenomics/wbs-rbioinfo
R es un lenguaje básico de referencia en el mundo de la estadística y una herramienta fundamental para el análisis de datos en el área de las ciencias de la vida. R permite automatizar los cálculos estadísticos y la generación de diversos gráficos para facilitar el análisis de datos.
Language: CSS - Size: 1.23 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 1
svsuresh/rscripts
Repository miscellaneous R scripts including scripts for RNAseq analysis
Language: Jupyter Notebook - Size: 1.95 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0
Seb943/Smith_Waterman_Py
Implementing the Smith-Waterman algorithm in Python
Language: Python - Size: 13.7 KB - Last synced at: 24 days ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 1
mughal41/Automate_HETATM_removal
Script to Automate removal of HETATOMS
Language: Python - Size: 1000 Bytes - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0
orangeSi/pykits
simple python script for bioinformatics
Language: Python - Size: 83 KB - Last synced at: about 2 months ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 0
arendsee/bioinfo-utils
A gallimaufry of questionable shellscripts
Language: Shell - Size: 103 KB - Last synced at: 10 months ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 1
kc-moharana/bioinformatics_codes
My PERL and other UNIX based codes developed while analysing NGS, microarray other data.
Language: Perl - Size: 612 KB - Last synced at: about 2 years ago - Pushed at: about 6 years ago - Stars: 2 - Forks: 2
zd200572/bioinfor-python
bioinformatics
Language: Python - Size: 217 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 2 - Forks: 2
NorwegianVeterinaryInstitute/DemultiplexRawSequenceData
A workflow automation script: demultiplex the library sequence, run quality checks, deliver to archiving and processing afterwards
Language: Python - Size: 501 MB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 1 - Forks: 0
RPINerd/biox_macguffins
A loose collection of random scripts I've generated over the years
Language: Python - Size: 193 KB - Last synced at: 30 days ago - Pushed at: 30 days ago - Stars: 1 - Forks: 0
pritampanda15/YouTube-Tutorials
Tutorials on bioinformatics, computational biology, molecular dynamics, and other specialized scientific tools and workflows.
Size: 2.95 MB - Last synced at: 6 days ago - Pushed at: 5 months ago - Stars: 1 - Forks: 0
conorheffron/global-max-sim-matrix
Compute Global Maximum Similarity Matrix for 2 Sequences
Language: R - Size: 250 KB - Last synced at: 5 days ago - Pushed at: 8 months ago - Stars: 1 - Forks: 0
Dogth/biomultitool
GUI for a few tools
Language: JavaScript - Size: 66.8 MB - Last synced at: 28 days ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0
thuylinhmk/Histone-Modification-Networks
histone modification hospot
Language: Python - Size: 8.56 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0
cinnetcrash/Biyoinformatik_TR
Bu sayfada Biyoinformatik analizler ile ilgili eğitim materyalleri bulunmaktadır.
Language: Shell - Size: 18.8 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 1 - Forks: 0
asadprodhan/Bioinformatics_Educational_Resources
Bioinformatics Educational Resources
Size: 149 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
xlq902/FAFSA-combine
This is a program written in c# for neat organization of FASTA files into one file to make multiple sequencing alignments easier.
Language: C# - Size: 9.77 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
V-Z/structure-multi-pbspro
Set of scripts to run STRUCTURE in parallel on computing grids like MetaCentrum. Scripts are designed for grids and clusters using PBS Pro, but can be easily adopted for another queue system.
Language: Shell - Size: 83 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 1
hzz0024/BioinfoTools
Introduction to CBSU server. A library of bioinformatics tools for data analyses and visualization.
Language: R - Size: 3.08 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
mr-y/my_bioinfPerls
Perl scripts for bioinformatics
Language: Perl - Size: 38.1 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 1
ShawnWx2019/Gh_circRNAseq
Analysis and visualization R scripts of my research 「Genome-wide profiling of circular RNAs during the hybridization of two elite inbred lines of Gossypium hirsutum
Language: R - Size: 334 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 0
EricHugo/bioUtils
Language: Python - Size: 33.2 KB - Last synced at: almost 2 years ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 0
dabane-ghassan/GFF-GTF-analysis
A bioinformatics script to analyse GFF/GTF files
Language: Python - Size: 8.79 KB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0
bhaveshashok/AutoDockVina-BatchSubmission
A simple batch submission script to submit jobs to AutoDock Vina on Linux and MacOS developed by Bhavesh Ashok.
Language: Shell - Size: 16.6 KB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 1
JFresnedo/AmpSeq
A framework for semi-automated analysis of Amplicon Sequencing data
Language: Perl - Size: 331 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 4
imengyuan/Bioinfo-pipelines
Sample bioinfo script collection.
Language: Python - Size: 29.9 MB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 2
PsiPhiTheta/Bioinformatics-Labs
Genome analysis scripts and laboratory files for the UofT Bioinformatics course
Language: R - Size: 7.79 MB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0
hexhead/Rinbix
R package implementations and interfaces to In silico research group's bioinformatics toolbox inbix
Language: R - Size: 652 KB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0
ainefairbrother/GenBank-parser
This is a parser written to extract data from a GenBank file and insert it into an SQL database. This is part of a project that I did for my MSc in Bioinformatics.
Language: Python - Size: 12.7 KB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0
bixBeta/xcode.beta
SLURM job temps @UALBANY
Language: Shell - Size: 14.6 KB - Last synced at: about 2 years ago - Pushed at: almost 7 years ago - Stars: 1 - Forks: 0
ElRakabawi/cgr-perl
chaos game representation for DNA seqs in Perl.
Language: Perl - Size: 13.7 KB - Last synced at: 11 months ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 0
mbhall88/tinysink
Synchronise Nanopore reads with a server.
Language: Shell - Size: 8.79 KB - Last synced at: 4 days ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 1
LuisSoares/Manuscript
Scripts used to created manuscript figures
Language: Jupyter Notebook - Size: 6.28 MB - Last synced at: about 1 month ago - Pushed at: about 8 years ago - Stars: 1 - Forks: 0
Bohdan-Khomtchouk/Differential-expression-scripts
Miscellaneous differential gene expression scripts in R
Language: R - Size: 1.95 KB - Last synced at: about 2 years ago - Pushed at: almost 9 years ago - Stars: 1 - Forks: 0
fomightez/humap3-binder
Using data from hu.MAP 3.0 with the convenience of Python and Jupyter.
Language: Jupyter Notebook - Size: 1.37 MB - Last synced at: about 14 hours ago - Pushed at: about 16 hours ago - Stars: 0 - Forks: 0
UmbertoDellaMonica/fp-mash
Fp-Mash contains an adaptation of the Mash tool specifically designed to process fingerprints as part of the lyn2vec project. The main objective is to leverage the capabilities of Mash for fast and efficient genome and metagenome distance estimation, and apply these features to the vectorization tasks in lyn2vec
Language: C++ - Size: 46 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 0 - Forks: 0
Alepidoptera7/MissingMotif
Determines the most probable sequences missing from a greater set of genomic reads.
Language: Python - Size: 7.81 KB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 0 - Forks: 0
Ashley-Milton/OAN-epigenetic-profiling
Language: R - Size: 41 KB - Last synced at: 27 days ago - Pushed at: 27 days ago - Stars: 0 - Forks: 0
royalseeker/hackbio-biocoding-internship
HackBio Internship
Language: Jupyter Notebook - Size: 1.21 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0
QmLHS/SAMBA
Saving Apples with MetaBarcoding Analysis
Language: Python - Size: 178 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0
Abibsb/Master_thesis
Recopilación de los resultados y herramientas generadas para la tesis de maestría "Estudio de la relación estructura-función en interfaces de complejos RNA-proteína", SBG-UNQ
Language: Python - Size: 5.71 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0
lucahennet/RNAseqWorkflow
Detection of differentially expressed genes from bulk RNA-seq data
Language: Shell - Size: 12.7 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
mhtjsh/ROSALIND-Problems
I am curating a my own solution repository take to Rosalind Questions. I feel Rosalind question are the Leetcode website which curates the best question to generally solve and attack the understanding part of the algorithms with the mix of Biology.
Language: Python - Size: 22.5 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
tony-zhelonkin/RNAseq_pipelineDock Fork of bschiffthaler/ngs
RNAseq preprocessing docker
Language: Shell - Size: 2.66 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 1
V-Z/structure-sum
Script to summarize the results from several structure runs
Language: R - Size: 28.3 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
jnbdz/bio-quickstarts
🦠 Biology (bioinformatic, biology, bio-hacking, etc) | Quickstarts 🦠
Size: 2.39 MB - Last synced at: 19 days ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0
IBCHgenomic/BIGG-metabolic-analyzer-API
a API to BIGG metabolic databases
Language: Python - Size: 189 KB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
adeschen/mpileupTools
This python script parses a mpileup file to extract the coverage of each base at each position.
Language: Python - Size: 34.2 KB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 0 - Forks: 2
SUGAM2001/DESeq2-Python-Example
This repository contains an example implementation of DESeq2 in Python.
Language: Python - Size: 2.1 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
IBCHgenomic/bacterial-KO-phylogenomics
analyzing bacterial genome based ontologies and phylogenomics informativeness
Language: Python - Size: 2.46 MB - Last synced at: about 1 month ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0
hansen-han/ena_rnaseq_quantification
Tool for easily downloading and quantifying RNAseq data from the European Nucleotide Archive (ENA) with Salmon.
Language: Python - Size: 30.3 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
Funny-Silkie/bayes-mapper
Maps the evaluation value of phylogenetic tree to another tree
Language: Python - Size: 22.5 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
V-Z/hybseq-course
Materials for course about processing HybSeq data on computing grids
Language: TeX - Size: 1.63 MB - Last synced at: 9 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0
chrisarg/alien-seqalignment-edlib
Sequence Alignment tool
Language: Perl - Size: 43 KB - Last synced at: about 18 hours ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0
