r-iterators | conda | Package Usage

rjof/coronavirus_dashboard_mexico

Fork of https://github.com/RamiKrispin/coronavirus_dashboard with minimal tweaks for Mexico

1.0.10 environment.yml

Size: 12.8 MB - Last synced: 5 months ago - Pushed: over 1 year ago

rjof/rjof.github.io

Personal projects

1.0.10 docs/environment.yml
1.0.10 environment.yml

Size: 38.5 MB - Last synced: 5 months ago - Pushed: over 1 year ago

ifremer-bioinformatics/samba

Standardized and Automated MetaBarcoding Analyses workflow (Mirror)

1.0.12 containers/r-3.6.1/environment.yml

Size: 109 MB - Last synced: 11 months ago - Pushed: 11 months ago

FORCOLAB-UofT/INFOX

This is a prototype for overview of GitHub forks.

1.0.9 environment.yaml

Size: 14.3 MB - Last synced: about 2 months ago - Pushed: 3 months ago

brucemoran/tumour_only

Tumour-only DNA sequencing analysis

1.0.13 environment.yaml

Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

btmartin721/ClineHelpR

Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables

1.0.13 environment.yml

Size: 93.4 MB - Last synced: 7 months ago - Pushed: almost 2 years ago

jseeman/publication-supplements

Code and data for research replication and reuse

1.0.10 2022_arsia/environment.yaml

Size: 511 KB - Last synced: about 1 year ago - Pushed: about 2 years ago

villegar/DoGE

Differential Gene Expression Analysis Pipeline

1.0.10.* environment.yml

Size: 16 MB - Last synced: 10 months ago - Pushed: almost 3 years ago

villegar/xxii-simmac

XXII SIMMAC (International Symposium on Mathematical Methods Applied to Sciences) - University of Costa Rica

1.0.10.* environment.yml

Size: 11.4 MB - Last synced: 10 months ago - Pushed: almost 3 years ago

InfantLab/little-drummers

1.0.10 analysis/environment.yml

Size: 1.04 GB - Last synced: about 1 year ago - Pushed: almost 2 years ago

BioinfoNet/TeachingJupyterNotebooks

Training materials for the Open Science Workshop held in Nariobi

1.0.9 environment.yml

Size: 16 MB - Last synced: about 1 year ago - Pushed: over 5 years ago

broadinstitute/malaria-amplicon-pipeline

1.0.13.* environment.yml

Size: 171 KB - Last synced: about 1 year ago - Pushed: about 1 year ago

Wiselab2/NGPINT

1.0.8 environment.yml

Size: 300 MB - Last synced: 7 months ago - Pushed: over 2 years ago

davidecolla/semantic_coherence_markers

1.0.10 environment.yml

Size: 390 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

web-mev/mev-normalize

1.0.13 docker/environment.yml

Size: 16.6 KB - Last synced: 20 days ago - Pushed: 3 months ago

nlm-irp-jianglab/Evolink

:palm_tree: A Phylogenetic Approach for Rapid Identification of Genotype-Phenotype Associations in Large-scale Microbial Multi-species Data

1.0.14 environment.yml

Size: 251 MB - Last synced: 9 months ago - Pushed: 9 months ago

GWeindel/lecture_R

A really short introduction (4 hours lecture) for psychology doctoral students at Aix Marseille University.

1.0.13 environment.yml

Size: 4 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

ColtonGarelli/notebooks2020

1.0.* environment.yml

Size: 20.5 KB - Last synced: 2 months ago - Pushed: almost 4 years ago

ajayago/NCMF_bioinformatics

1.0.10 CMF/environment.yml

Size: 202 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago

quadram-institute-bioscience/dadaist2

Dadaist2 🟨 Highway to R

1.0.13 lab/class/environment.yml

Size: 39.4 MB - Last synced: 3 months ago - Pushed: 3 months ago

jamesfitton/cxr

Intertidal water occurrence generator from Sentinel 2 satellite data and Google Earth Engine

1.0.14 environment.yml

Size: 1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

aw236/boilerplate_code

best functions

1.0.10.* environment.yml

Size: 380 KB - Last synced: 28 days ago - Pushed: 12 months ago

andrealauria104/ngsRtools

A Suite of R Packages for NGS-based Epigenomic Data Analysis.

1.0.10.* data/environment.yml

Size: 714 KB - Last synced: 28 days ago - Pushed: about 1 year ago

XinyanHe/INFOX Fork of FORCOLAB-UofT/INFOX

This is a prototype for overview of GitHub forks.

1.0.9 environment.yaml

Size: 12.6 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

sadamov/phenology_curve_fitting

Fitting of phenological season description curves to historical pollen measurements.

1.0.13 environment.yml

Size: 53.1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

greenelab/2022-cf-sputum

Analysis of cystic fibrosis sputum RNA-seq samples for discovery of interesting gene expression pathways

1.0.13 environment.yml

Size: 4.92 MB - Last synced: 9 months ago - Pushed: over 1 year ago

krinsman/droplets

1.0.13 environment.yml

Last synced: over 1 year ago

kevinpryan/caf-subtype-analysis

1.0.14 environment.yml

Size: 56.9 MB - Last synced: 8 months ago - Pushed: 8 months ago

gonzalosm98/scRNA-SeqAnalysis

1.0.13 environment.yml

Size: 62.5 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

cjc77/Fogg-Lab-RNA-Seq-analysis

Preliminary analysis and informatics for TCGA gynecological cancer data

1.0.13.* environment.yml

Size: 61.3 MB - Last synced: 4 months ago - Pushed: over 1 year ago

mfreitas/docker_dev_image

1.0.10 environment.yml

Last synced: over 1 year ago

mfreitas/dsclub_jupyter

Jupyter docker image

1.0.10 environment.yml

Last synced: over 1 year ago

athompson1991/crypto-project

Final project for machine learning class

1.0.10 environment.yml

Size: 1.68 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

dieterich-lab/ImmunOMICS

1.0.14 environment.yml

Size: 27.6 MB - Last synced: 2 months ago - Pushed: about 1 year ago

liaoherui/GDmicro

GDmicro - Use GCN and Deep adaptation network to classify host disease status based on human gut microbiome data.

1.0.13 environment.yaml

Size: 3.57 MB - Last synced: 23 days ago - Pushed: about 2 months ago

gagneurlab/transmicron

1.0.14.* environment.yml

Size: 16.7 MB - Last synced: 5 days ago - Pushed: over 1 year ago

samwitham/PromoterArchitecture

Arabidopsis thaliana promoter architecture analysis pipeline

1.0.12 environment.yml

Size: 187 MB - Last synced: 7 months ago - Pushed: 9 months ago

oscarlr/IGenotyper

1.0.10 environment.yml

Size: 10.2 MB - Last synced: 3 months ago - Pushed: 3 months ago

paezha/PyERT-BLACK

Capstone project for course 4G06

1.0.14 environment.yml

Size: 23.2 MB - Last synced: 11 days ago - Pushed: about 1 year ago

phbradley/tcr-gwas

Collaboration to find genetic variation associated with TCR repertoire differences

1.0.13 environment.yml

Size: 176 MB - Last synced: 27 days ago - Pushed: over 2 years ago

magdalenarussell/mechanistic-trimming

Collaboration to identify sequence-level determinants of nucleotide trimming during V(D)J recombination

1.0.14 environment.yml

Size: 185 MB - Last synced: 20 days ago - Pushed: 20 days ago

doku/actions_test

1.0.10 environment.yml

Size: 2.19 MB - Last synced: 9 months ago - Pushed: over 3 years ago

jacobschwan/conda-rstudio

RStudio Server with conda pacakge management

1.0.10 environment.yml

Size: 22.5 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago

russHyde/bfx_201909

Statistical Bioinformatics presentation

1.0.12.* envs/environment.yml

Size: 327 KB - Last synced: about 1 year ago - Pushed: over 4 years ago

AmirAlavi/sc-alignment-benchmarking

Supporting data and benchmarking software for our SCIPR paper. (Under Construction)

1.0.10 data/environment.yml

Size: 45.6 MB - Last synced: 10 months ago - Pushed: almost 4 years ago

mapcloud/phusion-jupyterlab

1.0.8 environment.yml

Size: 4.88 KB - Last synced: about 1 year ago - Pushed: almost 7 years ago

storm-platform/storm-gallery

A gallery of interesting codes based on Storm Platform technologies.

1.0.14.* applications/bdc-article/compendium/environment.yml
1.0.14.* applications/deforestation-detection/compendium/fraction-classification/environment.yml
1.0.14.* applications/sits-article/compendium/environment.yml

Size: 42.7 MB - Last synced: 24 days ago - Pushed: over 1 year ago

micaelamccall/nonverbal-behavior-FA

Habits of Non-verbal Intimacy: reducing number of dimensions using factor analysis

1.0.10 environment.yml

Size: 17.1 MB - Last synced: 7 months ago - Pushed: over 4 years ago

adrianjav/resnet-rkeras

Simplest implementation of ResNet in Keras for R

1.0.10 environment.yml

Size: 19.5 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago

alexetalbott/python_analysis_demo

a brief analysis of dummy delivery data in Python with Folium maps

1.0.10 environment.yml

Size: 1.22 MB - Last synced: about 1 year ago - Pushed: almost 4 years ago

waldeyr/EduComp2022

1.0.10 environment.yml

Size: 11.3 MB - Last synced: about 1 year ago - Pushed: over 2 years ago

giorgioangel/evc

Official repository of the paper "An Offline Risk-aware Policy Selection Method for Bayesian Markov Decision Processes"

1.0.14 environment.yml

Size: 58.6 KB - Last synced: 9 months ago - Pushed: almost 2 years ago

jhgille2/rna_seq_pipeline_template

WIP reproducible pipeline for rna seq differential expression analysis

1.0.14 environment.yml

Size: 77.1 KB - Last synced: about 1 year ago - Pushed: about 1 year ago

achmand/datascience-brexit

Case-study set out to statistically test whether any Brexit major event has an impact on various ﬁnancial markets

1.0.10 src/environment.yml

Size: 13.8 MB - Last synced: about 1 year ago - Pushed: almost 5 years ago

qbicsoftware/r-container-lib

A collection of project-related Dockerfiles for a controlled R environment with defined R packages

1.0.9 projects/QTEST/environment.yml

Size: 150 KB - Last synced: 2 days ago - Pushed: about 3 years ago

RPVote/jhub-rstudio

build jupyterhub-ready image with rstudio

binder/environment.yml

Size: 52.7 KB - Last synced: about 1 year ago - Pushed: almost 4 years ago

zdk123/SpiecEasiSLR_manuscript

Code to fetch data and reproduce figures for _Disentangling microbial associations from hidden environmental and technical factors via latent graphical models_

1.0.12.* docker/environment.yml

Size: 190 KB - Last synced: about 1 year ago - Pushed: over 4 years ago

MichelleBadri/NormCorr-manuscript

Code and data for reproducing NormCorr manuscript

1.0.12.* docker/environment.yml

Size: 106 KB - Last synced: about 1 year ago - Pushed: about 4 years ago

daewoooo/IntegrativePhasingPaper

Supplementary files for the study "Dense and accurate whole-chromosome haplotyping of individual genomes"

1.0.8 environment.yml

Size: 7.65 MB - Last synced: 2 days ago - Pushed: over 6 years ago

GallupGovt/ngs2

DARPA Next Generation Social Science (NGS2)

1.0.10 cycle3/Boomtown/Analysis/environment.yaml
1.0.10 cycle4/Boomtown/Analysis/environment.yaml

Size: 32.8 MB - Last synced: 8 months ago - Pushed: 12 months ago

crlero/snakemake-tutorial

1.0.14.* handson/workflow/environment.yaml

Size: 3.39 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago

Sabryr/Pmetrics_test

1.0.12.* environment.yml

Size: 4.04 MB - Last synced: 9 months ago - Pushed: almost 4 years ago

TeamPerie/Report_Daphne Fork of dvginneken/Reproduce_Thesis_InstitutCurie

1.0.14 environment.yml

Size: 32.6 MB - Last synced: 10 months ago - Pushed: 10 months ago

davidecarlson/Snakemake_diff_gene_expr

Differential Gene Expression with Snakemake

1.0.13 environment.yml

Size: 37.1 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago

yarikoptic/example-notebooks-1 Fork of dandi/example-notebooks

1.0.14 000039/AllenInstitute/environment.yml

Size: 16.1 MB - Last synced: 10 months ago - Pushed: 10 months ago

kylestanley1313/ffa-p1

A repository for code related to the first iteration of functional factor analysis (FFA).

1.0.14.* environment.yml

Size: 1.17 MB - Last synced: 28 days ago - Pushed: 6 months ago

bionetslab/ALS_MELC_Data_Analysis

1.0.10 environment.yml

Size: 256 MB - Last synced: 5 months ago - Pushed: 5 months ago

Mye-InfoBank/SIMBA

A nextflow pipeline for processing sc-RNASeq data, performing QC and integration and preparing the results for further investigation using cellxgene.

1.0.14 docker/rpy/environment.yml

Size: 981 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

nathan-adeyemi/Inpatient-Bed-Allocation-Optimization

1.0.14.* environment.yaml

Size: 8.22 MB - Last synced: 4 months ago - Pushed: 4 months ago

Kenneth-Mitchell/HMC-Thesis

1.0.14 environment.yml

Size: 8.85 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

fdu-wangfeilab/stDiff

A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.

1.0.10 environment.yml

Size: 268 MB - Last synced: about 12 hours ago - Pushed: 2 months ago

quevedor2/mini_projects

Repository for mini projects that don't warrant a repo of their own

1.0.13 PDAC_AhR/envs/environment.yaml

Size: 657 KB - Last synced: 11 days ago - Pushed: 12 days ago

is-the-biologist/QC_long_reads

1.0.14 workflow/envs/environment.yml

Size: 157 MB - Last synced: 18 days ago - Pushed: 18 days ago

Jianhua-Wang/easyfinemap

user-friendly pipeline for GWAS fine-mapping

1.0.14 environment.yml

Size: 50.6 MB - Last synced: 27 days ago - Pushed: 28 days ago

a-hr/pol2speed_pipeline

1.0.14 environment.yaml

Size: 15.9 MB - Last synced: about 12 hours ago - Pushed: about 13 hours ago

SteinPanyu/IndependentReproducibility

1.0.14 environment.yaml

Size: 20.2 MB - Last synced: 7 days ago - Pushed: 7 days ago

dandi/example-notebooks

1.0.14 000039/AllenInstitute/environment.yml

Size: 57.5 MB - Last synced: 1 day ago - Pushed: 1 day ago

Package Usage: conda: r-iterators

Dependent Repos 40

XinyanHe/INFOX Fork of FORCOLAB-UofT/INFOX

TeamPerie/Report_Daphne Fork of dvginneken/Reproduce_Thesis_InstitutCurie

yarikoptic/example-notebooks-1 Fork of dandi/example-notebooks