Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

Package Usage: conda: r-pkgbuild

Find tools needed to build R packages
13 versions
Latest release: over 2 years ago
9 dependent packages

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/r-pkgbuild

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/r-lib%2Fpkgbuild

Dependent Repos 26

brucemoran/tumour_only
Tumour-only DNA sequencing analysis
  • 1.2.0 environment.yaml

Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

btmartin721/ClineHelpR
Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables
  • 1.2.0 environment.yml

Size: 93.4 MB - Last synced: 7 months ago - Pushed: almost 2 years ago

russHyde/russ-hyde
Public content for my blog
  • 1.0.3.* envs/environment.yaml

Size: 5.17 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

lfnothias/qiime2
  • 1.1.0.* environment.yml

Size: 21.5 KB - Last synced: about 1 year ago - Pushed: over 3 years ago

krinsman/dissertation
Source code and Jupyter notebooks related to PhD dissertation.
  • 1.2.0 environment.yml

Last synced: over 1 year ago

moj-analytical-services/DefCalc
The deflator calculator.
  • 1.0.7 environment.yml

Size: 4.83 MB - Last synced: 10 months ago - Pushed: 10 months ago

evoosa/16S_bacteria_detector
Gets the frequency of bacterias for 16S RRNA sequences using the available algorithms
  • 1.0.7 src/environment.yml

Size: 97.4 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

web-mev/mev-normalize
  • 1.2.0 docker/environment.yml

Size: 16.6 KB - Last synced: 21 days ago - Pushed: 3 months ago

GWeindel/lecture_R
A really short introduction (4 hours lecture) for psychology doctoral students at Aix Marseille University.
  • 1.2.0 environment.yml

Size: 4 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

kelly-sovacool/meta-repo
A meta-repository to organize my public projects.
  • 1.0.6 config/environment.yml

Size: 33.2 MB - Last synced: 9 months ago - Pushed: 9 months ago

jamesfitton/cxr
Intertidal water occurrence generator from Sentinel 2 satellite data and Google Earth Engine
  • 1.3.1 environment.yml

Size: 1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

sadamov/pollenmaps
Creating some nice maps in R
  • 1.2.0 environment.yml

Size: 79.6 MB - Last synced: about 1 year ago - Pushed: over 2 years ago

omicsclass/biodocker
docker images for bioinformatics
  • 1.0.7.* ampliseq-q2/environment.yml

Size: 59.2 MB - Last synced: 11 months ago - Pushed: over 1 year ago

russHyde/mast-shiny
Notes / code from working through "Mastering Shiny". Written while running a R4DS bookclub
  • 1.2.0.* conda/environment.yml

Size: 154 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago

greenelab/2022-cf-sputum
Analysis of cystic fibrosis sputum RNA-seq samples for discovery of interesting gene expression pathways
  • 1.2.0 environment.yml

Size: 4.92 MB - Last synced: 9 months ago - Pushed: over 1 year ago

kevinpryan/caf-subtype-analysis
  • 1.3.1 environment.yml

Size: 56.9 MB - Last synced: 8 months ago - Pushed: 8 months ago

rahulbhatiak/aml
Files / Projects/ Notebooks relating to Advanced Machine Learning Course taken Fall 2020
  • 1.0.7 environment.yaml

Last synced: about 1 year ago

cjc77/Fogg-Lab-RNA-Seq-analysis
Preliminary analysis and informatics for TCGA gynecological cancer data
  • 1.2.0.* environment.yml

Size: 61.3 MB - Last synced: 4 months ago - Pushed: over 1 year ago

EpiDiverse/dmr
The EpiDiverse Differentially Methylated Regions Pipeline, implemented with Nextflow
  • 1.1.0.* env/environment.yml

Size: 1.41 MB - Last synced: about 1 year ago - Pushed: over 2 years ago

bailey-lab/MIPTools
A suite of computational tools used for molecular inversion probe design, data processing, and analysis.
  • environment.yml

Size: 270 MB - Last synced: about 11 hours ago - Pushed: about 12 hours ago

samwitham/PromoterArchitecture
Arabidopsis thaliana promoter architecture analysis pipeline
  • 1.1.0 environment.yml

Size: 187 MB - Last synced: 7 months ago - Pushed: 9 months ago

magdalenarussell/mechanistic-trimming
Collaboration to identify sequence-level determinants of nucleotide trimming during V(D)J recombination
  • 1.3.1 environment.yml

Size: 185 MB - Last synced: 20 days ago - Pushed: 20 days ago

russHyde/bfx_201909
Statistical Bioinformatics presentation
  • 1.0.5.* envs/environment.yml

Size: 327 KB - Last synced: about 1 year ago - Pushed: over 4 years ago

AmirAlavi/sc-alignment-benchmarking
Supporting data and benchmarking software for our SCIPR paper. (Under Construction)
  • 1.0.3 data/environment.yml

Size: 45.6 MB - Last synced: 10 months ago - Pushed: almost 4 years ago

IanSudbery/alvarez_et_al
Code and other scripts for Alvarez-Beneyas et al 2020
  • 1.0.7 environment.yml

Size: 41.2 MB - Last synced: 9 months ago - Pushed: over 2 years ago

dpryan79/kiwanisbewegt
Automatic participant map generation for kiwanisbewegt
  • 1.2.0 environment.yaml

Size: 19.4 MB - Last synced: 9 months ago - Pushed: about 2 years ago

storm-platform/storm-gallery
A gallery of interesting codes based on Storm Platform technologies.
  • 1.3.1.* applications/bdc-article/compendium/environment.yml
  • 1.3.1.* applications/deforestation-detection/compendium/fraction-classification/environment.yml
  • 1.3.1.* applications/sits-article/compendium/environment.yml

Size: 42.7 MB - Last synced: 24 days ago - Pushed: over 1 year ago

maizeumn/grn
Maize Gene regulatory network (MaizeGRN)
  • 1.1.0.* environment.yml

Size: 24.1 MB - Last synced: about 1 year ago - Pushed: over 3 years ago

joaopalmeiro/r-playground
Some experiments with R.
  • 1.2.0.* clifford-attractor/environment.yml

Size: 4.08 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

nerettilab/scRNA_seq
Utilities scripts for the analysis of single cell transcriptomics
  • 1.2.0 environment.yml

Size: 23.4 KB - Last synced: 5 months ago - Pushed: almost 3 years ago

arisp99/miptools-sandbox
A sandbox for testing MIPTools functions
  • environment.yml

Size: 8 MB - Last synced: about 1 year ago - Pushed: about 2 years ago

mwang87/GNPS_Volatility_Notebooks
  • 1.0.7.* environment.yml

Size: 14.6 KB - Last synced: about 1 year ago - Pushed: over 3 years ago

zdk123/SpiecEasiSLR_manuscript
Code to fetch data and reproduce figures for _Disentangling microbial associations from hidden environmental and technical factors via latent graphical models_
  • 1.0.6.* docker/environment.yml

Size: 190 KB - Last synced: about 1 year ago - Pushed: over 4 years ago

MichelleBadri/NormCorr-manuscript
Code and data for reproducing NormCorr manuscript
  • 1.0.6.* docker/environment.yml

Size: 106 KB - Last synced: about 1 year ago - Pushed: about 4 years ago

GallupGovt/ngs2
DARPA Next Generation Social Science (NGS2)
  • 1.0.3 cycle3/Boomtown/Analysis/environment.yaml
  • 1.0.3 cycle4/Boomtown/Analysis/environment.yaml

Size: 32.8 MB - Last synced: 8 months ago - Pushed: 12 months ago

Sabryr/Pmetrics_test
  • 1.0.6.* environment.yml

Size: 4.04 MB - Last synced: 9 months ago - Pushed: almost 4 years ago

TeamPerie/Report_Daphne Fork of dvginneken/Reproduce_Thesis_InstitutCurie
  • 1.4.0 environment.yml

Size: 32.6 MB - Last synced: 10 months ago - Pushed: 10 months ago

davidecarlson/Snakemake_diff_gene_expr
Differential Gene Expression with Snakemake
  • 1.1.0 environment.yml

Size: 37.1 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago

yarikoptic/example-notebooks-1 Fork of dandi/example-notebooks
  • 1.4.0 000039/AllenInstitute/environment.yml

Size: 16.1 MB - Last synced: 10 months ago - Pushed: 10 months ago

ministryofjustice/occupeye-shiny-app
• This repository is defined and managed in Terraform
  • 1.0.2 environment.yml

Size: 488 KB - Last synced: about 1 month ago - Pushed: 6 months ago

bionetslab/ALS_MELC_Data_Analysis
  • 1.0.3 environment.yml

Size: 256 MB - Last synced: 5 months ago - Pushed: 5 months ago

Mye-InfoBank/SIMBA
A nextflow pipeline for processing sc-RNASeq data, performing QC and integration and preparing the results for further investigation using cellxgene.
  • 1.4.2 docker/rpy/environment.yml

Size: 981 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

fdu-wangfeilab/stDiff
A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.
  • 1.0.3 environment.yml

Size: 268 MB - Last synced: about 15 hours ago - Pushed: 2 months ago

quevedor2/mini_projects
Repository for mini projects that don't warrant a repo of their own
  • 1.2.0 PDAC_AhR/envs/environment.yaml

Size: 657 KB - Last synced: 11 days ago - Pushed: 12 days ago

dandi/example-notebooks
  • 1.4.0 000039/AllenInstitute/environment.yml

Size: 57.5 MB - Last synced: 1 day ago - Pushed: 1 day ago