Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
Package Usage: conda: r-tidyselect
8 versions
Latest release: over 1 year ago
72 dependent packages
View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/r-tidyselect
Dependent Repos 67
rjof/coronavirus_dashboard_mexico
Fork of https://github.com/RamiKrispin/coronavirus_dashboard with minimal tweaks for Mexico- 0.2.5 environment.yml
Size: 12.8 MB - Last synced: 5 months ago - Pushed: over 1 year ago
rjof/rjof.github.io
Personal projects- 0.2.5 docs/environment.yml
- 0.2.5 environment.yml
Size: 38.5 MB - Last synced: 5 months ago - Pushed: over 1 year ago
ifremer-bioinformatics/samba
Standardized and Automated MetaBarcoding Analyses workflow (Mirror)- 0.2.5 containers/r-3.6.1/environment.yml
Size: 109 MB - Last synced: 11 months ago - Pushed: 11 months ago
FORCOLAB-UofT/INFOX
This is a prototype for overview of GitHub forks.- 0.2.3 environment.yaml
Size: 14.3 MB - Last synced: about 2 months ago - Pushed: 3 months ago
nixiwang/PISAnalysisTool
An analysis tool of multi-level modeling for PISA dataset- 0.2.4 environment.yml
Size: 44.1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
brucemoran/tumour_only
Tumour-only DNA sequencing analysis- 1.1.1 environment.yaml
Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
btmartin721/ClineHelpR
Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables- 1.1.1 environment.yml
Size: 93.4 MB - Last synced: 7 months ago - Pushed: almost 2 years ago
jseeman/publication-supplements
Code and data for research replication and reuse- 0.2.5 2022_arsia/environment.yaml
Size: 511 KB - Last synced: about 1 year ago - Pushed: about 2 years ago
villegar/DoGE
Differential Gene Expression Analysis Pipeline- 0.2.5.* environment.yml
Size: 16 MB - Last synced: 10 months ago - Pushed: almost 3 years ago
russHyde/russ-hyde
Public content for my blog- 0.2.5.* envs/environment.yaml
Size: 5.17 MB - Last synced: about 1 year ago - Pushed: about 3 years ago
InfantLab/little-drummers
- 0.2.5 analysis/environment.yml
Size: 1.04 GB - Last synced: about 1 year ago - Pushed: almost 2 years ago
mskcc/ACCESS-Pipeline
cfDNA Sequencing Pipeline with UMI- 0.2.5.* environment.yaml
Size: 276 MB - Last synced: 3 days ago - Pushed: over 1 year ago
krinsman/dissertation
Source code and Jupyter notebooks related to PhD dissertation.- 1.1.0 environment.yml
Last synced: over 1 year ago
vaqm2/custom_gwas
Python Code using CyVCF2 to run custom GWAS models on imputed VCF files- 1.1.2.* environment.yml
Size: 958 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago
BioinfoNet/TeachingJupyterNotebooks
Training materials for the Open Science Workshop held in Nariobi- 0.2.3 environment.yml
Size: 16 MB - Last synced: about 1 year ago - Pushed: over 5 years ago
moj-analytical-services/DefCalc
The deflator calculator.- 1.0.0 environment.yml
Size: 4.83 MB - Last synced: 10 months ago - Pushed: 10 months ago
evoosa/16S_bacteria_detector
Gets the frequency of bacterias for 16S RRNA sequences using the available algorithms- 0.2.4 src/environment.yml
Size: 97.4 MB - Last synced: about 1 year ago - Pushed: about 3 years ago
davidecolla/semantic_coherence_markers
- 0.2.5 environment.yml
Size: 390 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
nlm-irp-jianglab/Evolink
:palm_tree: A Phylogenetic Approach for Rapid Identification of Genotype-Phenotype Associations in Large-scale Microbial Multi-species Data- 1.1.2 environment.yml
Size: 251 MB - Last synced: 9 months ago - Pushed: 9 months ago
GWeindel/lecture_R
A really short introduction (4 hours lecture) for psychology doctoral students at Aix Marseille University.- 1.1.0 environment.yml
Size: 4 MB - Last synced: about 1 year ago - Pushed: about 3 years ago
apratimbhattacharyya18/nerf
- 0.2.4 environment.yml
Size: 491 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
ColtonGarelli/notebooks2020
- 1.1.* environment.yml
Size: 20.5 KB - Last synced: 2 months ago - Pushed: almost 4 years ago
dahjan/DMS_opt
- 0.2.5 environment.yml
Size: 7.82 MB - Last synced: 7 months ago - Pushed: over 3 years ago
happykhan/journal
Citation lists- 1.1.2 environment.yml
Size: 28 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
ajayago/NCMF_bioinformatics
- 0.2.5 CMF/environment.yml
Size: 202 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
quadram-institute-bioscience/dadaist2
Dadaist2 π¨ Highway to R- 1.1.1 lab/class/environment.yml
Size: 39.4 MB - Last synced: 3 months ago - Pushed: 3 months ago
kelly-sovacool/meta-repo
A meta-repository to organize my public projects.- 0.2.5 config/environment.yml
Size: 33.2 MB - Last synced: 9 months ago - Pushed: 9 months ago
jamesfitton/cxr
Intertidal water occurrence generator from Sentinel 2 satellite data and Google Earth Engine- 1.1.2 environment.yml
Size: 1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
yangmqglobe/dapipe
θͺε¨εη ATAC-Seq εζζ΅η¨- 1.1.0.* environment.yml
Size: 193 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
aw236/boilerplate_code
best functions- 0.2.5.* environment.yml
Size: 380 KB - Last synced: 27 days ago - Pushed: 12 months ago
andrealauria104/ngsRtools
A Suite of R Packages for NGS-based Epigenomic Data Analysis.- 0.2.5.* data/environment.yml
Size: 714 KB - Last synced: 27 days ago - Pushed: about 1 year ago
brucemoran/somatic_n-of-1
Somatic-Germline n-of-1 DNAseq Analysis- environment.yaml
Size: 317 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
Colorado-State-University-CMB/Intro-to-qCMB-2022
Class work for Intro to qCMB- 1.1.2 R_on_Summit/environment.yml
Size: 31.4 MB - Last synced: about 2 months ago - Pushed: over 1 year ago
XinyanHe/INFOX Fork of FORCOLAB-UofT/INFOX
This is a prototype for overview of GitHub forks.- 0.2.3 environment.yaml
Size: 12.6 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
SERVIR/mekong-swat-django
- 1.1.2 environment.yml
Size: 1.58 MB - Last synced: about 2 months ago - Pushed: over 1 year ago
sadamov/phenology_curve_fitting
Fitting of phenological season description curves to historical pollen measurements.- 1.1.1 environment.yml
Size: 53.1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
russHyde/mast-shiny
Notes / code from working through "Mastering Shiny". Written while running a R4DS bookclub- 1.1.0.* conda/environment.yml
Size: 154 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago
vfonsecad/multivariate_calibration
Multivariate calibration algorithms for regression in chemometrics- 0.2.5 environment.yml
Size: 126 MB - Last synced: about 1 year ago - Pushed: about 2 years ago
greenelab/2022-cf-sputum
Analysis of cystic fibrosis sputum RNA-seq samples for discovery of interesting gene expression pathways- 1.1.1 environment.yml
Size: 4.92 MB - Last synced: 9 months ago - Pushed: over 1 year ago
kirbyvisp/marmo
MARMO is a Modular and Robust pipeline for iMmune single-cell multi-Omics implemented in Snakemake.- 0.2.3 environment.yaml
Size: 2.86 MB - Last synced: over 1 year ago
Abraham-newbie/Replication
Replication of Barrera et. al. and further extension.- environment.yml
Size: 16.7 MB - Last synced: 11 months ago - Pushed: almost 2 years ago
wrightdw/COG-UK-ME
COG-UK Mutation Explorer- 1.1.1 environment.yml
Size: 105 MB - Last synced: 3 months ago - Pushed: 3 months ago
naim-panjwani/LocusFocus
Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)- 1.1.0 environments/environment.yml
Size: 76.7 MB - Last synced: 4 days ago - Pushed: about 1 year ago
kevinpryan/caf-subtype-analysis
- 1.1.2 environment.yml
Size: 56.9 MB - Last synced: 8 months ago - Pushed: 8 months ago
mr-eyes/denovo-rnaseq
De novo assembly, Differential gene expression, and annotation workflow- 1.1.2 environment.yml
Size: 1.79 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
gonzalosm98/scRNA-SeqAnalysis
- 1.1.1 environment.yml
Size: 62.5 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
cjc77/Fogg-Lab-RNA-Seq-analysis
Preliminary analysis and informatics for TCGA gynecological cancer data- 1.1.0.* environment.yml
Size: 61.3 MB - Last synced: 4 months ago - Pushed: over 1 year ago
athompson1991/crypto-project
Final project for machine learning class- 0.2.4 environment.yml
Size: 1.68 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
Skiracer33/stancon2019
notebook for stancon2019- 0.2.4 environment.yml
Size: 4.43 MB - Last synced: 12 months ago - Pushed: over 1 year ago
stefanuddenberg/psipypublish
A variant of Chris Sewell's ipypublish, designed for psychological research.- 0.2.4 template/environment_info/environment.yml
Size: 1.82 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
dieterich-lab/ImmunOMICS
- 1.2.0 environment.yml
Size: 27.6 MB - Last synced: 2 months ago - Pushed: about 1 year ago
sgvaze/generalized-category-discovery
Code for our CVPR 2022 paper 'Generalized Category Discovery'. Project page: https://www.robots.ox.ac.uk/~vgg/research/gcd/- 0.2.5 environment.yml
Size: 3.63 MB - Last synced: 23 days ago - Pushed: over 1 year ago
liaoherui/GDmicro
GDmicro - Use GCN and Deep adaptation network to classify host disease status based on human gut microbiome data.- 1.1.1 environment.yaml
Size: 3.57 MB - Last synced: 22 days ago - Pushed: about 2 months ago
gagneurlab/transmicron
- 1.1.2.* environment.yml
Size: 16.7 MB - Last synced: 5 days ago - Pushed: over 1 year ago
clemente-lab/mmeds-meta
A database for storing and analyzing omics data- 1.1.1 docs/environment.yml
Size: 890 MB - Last synced: about 2 months ago - Pushed: 3 months ago
samwitham/PromoterArchitecture
Arabidopsis thaliana promoter architecture analysis pipeline- 1.1.0 environment.yml
Size: 187 MB - Last synced: 7 months ago - Pushed: 9 months ago
SteMIDIfactory/P-DOR
Quick and easy outbreak reconstruction pipeline- 1.1.2 environment.yml
Size: 37.7 MB - Last synced: 3 months ago - Pushed: 8 months ago
mjaquiery/genetics-snakemake
Snakemake workflow for handling PRS scores and relatedness calculations for human genetic data from ALSPAC.- 1.2.0 workflow/envs/environment.yaml
Size: 1.44 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
paezha/PyERT-BLACK
Capstone project for course 4G06- 1.1.2 environment.yml
Size: 23.2 MB - Last synced: 11 days ago - Pushed: about 1 year ago
phbradley/tcr-gwas
Collaboration to find genetic variation associated with TCR repertoire differences- 1.1.1 environment.yml
Size: 176 MB - Last synced: 26 days ago - Pushed: over 2 years ago
magdalenarussell/mechanistic-trimming
Collaboration to identify sequence-level determinants of nucleotide trimming during V(D)J recombination- 1.1.2 environment.yml
Size: 185 MB - Last synced: 20 days ago - Pushed: 20 days ago
doku/actions_test
- 0.2.5 environment.yml
Size: 2.19 MB - Last synced: 9 months ago - Pushed: over 3 years ago
taoualiw/Data-Science-Basics
Some scripts for basic data analysis methods- Work on Progress- 0.2.5 environment.yml
Size: 89.8 KB - Last synced: 9 months ago - Pushed: about 5 years ago
jacobschwan/conda-rstudio
RStudio Server with conda pacakge management- 0.2.5 environment.yml
Size: 22.5 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago
neavemj/mappd
Metagenomic Analysis Pipeline for Pathogen Discovery- 0.2.5 environment.yaml
Size: 924 KB - Last synced: 8 months ago - Pushed: 8 months ago
russHyde/bfx_201909
Statistical Bioinformatics presentation- 0.2.5.* envs/environment.yml
Size: 327 KB - Last synced: about 1 year ago - Pushed: over 4 years ago
andurill/ACCESS-Pipeline
cfDNA Sequencing Pipeline with UMI- 0.2.5.* environment.yaml
Size: 276 MB - Last synced: about 1 year ago - Pushed: over 2 years ago
EpiDiverse/ewas
The EpiDiverse Epigenome-Wide Association Study Pipeline, implemented with Nextflow- 1.1.1.* env/environment.yml
Size: 20.9 MB - Last synced: 7 months ago - Pushed: about 1 year ago
AmirAlavi/sc-alignment-benchmarking
Supporting data and benchmarking software for our SCIPR paper. (Under Construction)- 0.2.5 data/environment.yml
Size: 45.6 MB - Last synced: 10 months ago - Pushed: almost 4 years ago
IanSudbery/alvarez_et_al
Code and other scripts for Alvarez-Beneyas et al 2020- 1.0.0 environment.yml
Size: 41.2 MB - Last synced: 9 months ago - Pushed: over 2 years ago
rpolicastro/barcode-generator
- 0.2.5 SINGULARITY/environment.yml
Size: 21.5 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago
storm-platform/storm-gallery
A gallery of interesting codes based on Storm Platform technologies.- 1.1.1.* applications/bdc-article/compendium/environment.yml
- 1.1.1.* applications/deforestation-detection/compendium/fraction-classification/environment.yml
- 1.1.1.* applications/sits-article/compendium/environment.yml
Size: 42.7 MB - Last synced: 24 days ago - Pushed: over 1 year ago
nasiegel88/airquality
- 1.1.1 environment.yml
Size: 1.06 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
micaelamccall/nonverbal-behavior-FA
Habits of Non-verbal Intimacy: reducing number of dimensions using factor analysis- 0.2.5 environment.yml
Size: 17.1 MB - Last synced: 7 months ago - Pushed: over 4 years ago
adrianjav/resnet-rkeras
Simplest implementation of ResNet in Keras for R- 0.2.5 environment.yml
Size: 19.5 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago
maizeumn/grn
Maize Gene regulatory network (MaizeGRN)- 1.1.0.* environment.yml
Size: 24.1 MB - Last synced: about 1 year ago - Pushed: over 3 years ago
vfonov/re_mtl
- environment.yml
Size: 16.2 MB - Last synced: about 1 year ago - Pushed: about 4 years ago
joaopalmeiro/r-playground
Some experiments with R.- 1.1.0.* clifford-attractor/environment.yml
Size: 4.08 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago
alexetalbott/python_analysis_demo
a brief analysis of dummy delivery data in Python with Folium maps- 0.2.5 environment.yml
Size: 1.22 MB - Last synced: about 1 year ago - Pushed: almost 4 years ago
stanfordmlgroup/lca-code
LiverCancerAssistant- 0.2.4.* paper/aihc-stats/environment.yml
- 0.2.4.* paper/aihc_stats/environment.yml
Size: 651 KB - Last synced: about 1 month ago - Pushed: about 4 years ago
giorgioangel/evc
Official repository of the paper "An Offline Risk-aware Policy Selection Method for Bayesian Markov Decision Processes"- 1.1.1 environment.yml
Size: 58.6 KB - Last synced: 9 months ago - Pushed: almost 2 years ago
yangmqglobe/depipe
θͺε¨εη ChIP-Seq εζζ΅η¨- 1.1.1.* environment.yml
Size: 16.7 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
hupi-analytics/formation
- 1.1.0.* bureau_etudes_insa/2021/prediction_t0/environment.yml
Size: 136 MB - Last synced: 4 months ago - Pushed: about 2 years ago
nerettilab/scRNA_seq
Utilities scripts for the analysis of single cell transcriptomics- 1.1.0 environment.yml
Size: 23.4 KB - Last synced: 5 months ago - Pushed: almost 3 years ago
SystemsBiologist/PSCAN
- 0.2.5 environment.yml
Size: 14.2 MB - Last synced: about 1 month ago - Pushed: over 4 years ago
jhgille2/Transcriptome-length-discrepency-tool
Some code to (hopefully) help to resolve an issue where sequences in a BAM/SAM header have a different length indicated than what is indicated in both a gtf file and transcriptome file used in a common pipeline- 1.2.0 environment.yml
Size: 32.2 KB - Last synced: about 1 year ago - Pushed: about 1 year ago
jhgille2/rna_seq_pipeline_template
WIP reproducible pipeline for rna seq differential expression analysis- 1.2.0 environment.yml
Size: 77.1 KB - Last synced: about 1 year ago - Pushed: about 1 year ago
zia-foisal/reproducible_drought_index
A repository to practice reproducible research practices while studing the state of the drought around the world- 1.1.2 environment.yaml
Size: 10.7 KB - Last synced: 12 months ago - Pushed: over 1 year ago
Sparrow0hawk/githubActionTest
- environment.yml
Size: 1.95 KB - Last synced: about 1 year ago - Pushed: over 3 years ago
achmand/datascience-brexit
Case-study set out to statistically test whether any Brexit major event has an impact on various ο¬nancial markets- 0.2.4 src/environment.yml
Size: 13.8 MB - Last synced: about 1 year ago - Pushed: almost 5 years ago
qbicsoftware/r-container-lib
A collection of project-related Dockerfiles for a controlled R environment with defined R packages- 0.2.3 projects/QTEST/environment.yml
Size: 150 KB - Last synced: 2 days ago - Pushed: about 3 years ago
zdk123/SpiecEasiSLR_manuscript
Code to fetch data and reproduce figures for _Disentangling microbial associations from hidden environmental and technical factors via latent graphical models_- 0.2.5.* docker/environment.yml
Size: 190 KB - Last synced: about 1 year ago - Pushed: over 4 years ago