GitHub / bissessk / RNA-seq-Analysis-of-Control-and-NRDE2-depleted-Breast-Cancer-Cells

Performed a differential gene expression analysis with RNA-seq that compares the expression in human control breast cancer cell lines with lines treated by silencing the NRDE2 gene. A Salmon + tximport + DESeq2 workflow was conducted to pursue this.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bissessk%2FRNA-seq-Analysis-of-Control-and-NRDE2-depleted-Breast-Cancer-Cells

Topics: bioinformatics, bioinformatics-pipeline, deseq2, hpc, linux, next-generation-sequencing, ngs, ngs-analysis, r, rna-seq, rna-seq-analysis, rna-seq-data, rna-seq-pipeline, rna-sequencing, rnaseq, rstudio, salmon, salmon-deseq2, tximport, unix

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