giffordlabcvr/NCBI-HCV-GLUE

Extension to HCV-GLUE - contains all published HCV data from NCBI, plus analysis logic for HCV genomes.

Language: JavaScript - Size: 388 MB - Last synced at: 3 days ago - Pushed at: 4 days ago - Stars: 0 - Forks: 0

pentalpha/protein_dimension_db

Datasets with embeddings and other representations for all proteins in Uniprot/Swiss-Prot

Language: Python - Size: 33.8 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 6 - Forks: 0

ZealousGeneticist/cartoflow

A Python workflow for taking chemicals, finding the genes they interact with, and mapping the communities of genetic interactions.

Language: Python - Size: 63.5 KB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 2 - Forks: 0

mobidic/SEAL

SEAL db - Simple, Efficient And Lite database for NGS

Language: HTML - Size: 16.8 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 10 - Forks: 1

giffordlabcvr/HCV-GLUE

A GLUE project for Hepatitis C virus (HCV)

Language: F* - Size: 136 MB - Last synced at: about 1 month ago - Pushed at: 5 months ago - Stars: 2 - Forks: 0

sourmash-bio/wort

A database for signatures of public genomic sources

Language: Python - Size: 526 KB - Last synced at: 2 days ago - Pushed at: about 2 months ago - Stars: 18 - Forks: 2

Bohdan-Khomtchouk/PubData

Smart search engine for all bioinformatics databases worldwide

Language: Python - Size: 80.2 MB - Last synced at: 3 months ago - Pushed at: over 7 years ago - Stars: 27 - Forks: 5

giffordlabcvr/Deltaretrovirus-GLUE

A GLUE project for Deltaretroviruses

Language: JavaScript - Size: 13 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

Bohdan-Khomtchouk/FTPwalker

PyPI package for traversing extremely large FTP directory trees

Language: Python - Size: 225 KB - Last synced at: 3 months ago - Pushed at: over 7 years ago - Stars: 18 - Forks: 3

arezoupst/BioPython

BioPython is a Python library for analyzing biological sequences.

Language: Jupyter Notebook - Size: 674 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

ComPath/ComPath

A web application for exploring, analyzing, and curating pathway databases

Language: JavaScript - Size: 28.6 MB - Last synced at: 13 days ago - Pushed at: over 1 year ago - Stars: 13 - Forks: 0

bystrogenomics/bystro

Bystro genetic analysis (annotation, filtering, statistics)

Language: Python - Size: 73 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 40 - Forks: 13

carrineblank/MicrO

A Microbial Ontology of Phenotypic and Metabolic Characters, Assays, and Culture Media Found in Prokaryotic Taxonomic Descriptions

Size: 11 MB - Last synced at: 10 months ago - Pushed at: almost 7 years ago - Stars: 6 - Forks: 3

giffordlabcvr/NCBI-HBV-GLUE

Extension to HBV-GLUE - incorporates all sequences from GenBank.

Size: 121 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0

giffordlabcvr/NCBI-RABV-GLUE

Extension to RABV-GLUE capturing NCBI data.

Language: JavaScript - Size: 66 MB - Last synced at: 5 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

maitreyeepaliwal/Alleropedia-Database-for-Allergens

Metadetabase of 13145 records generated for Allergens with a tabular view of the data. Web interface connected to ease the use, analysis and extraction of data with several added functionalities. Tutorial section added to educate the users of the interface design and features and the database.

Language: HTML - Size: 994 KB - Last synced at: 3 months ago - Pushed at: almost 4 years ago - Stars: 7 - Forks: 0

njpipeorgan/L1000-bayesian

L1000 peak deconvolution based on Bayesian analysis

Language: Mathematica - Size: 11.8 MB - Last synced at: 12 months ago - Pushed at: over 3 years ago - Stars: 24 - Forks: 5

labstructbioinf/localpdb

Python package to manage protein structures and their annotations

Language: Python - Size: 1.72 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 38 - Forks: 4

gversmee/dbgap2x

Language: Jupyter Notebook - Size: 8.58 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 8 - Forks: 7

b-cell-immunology/sciReptor 📦

Single-Cell Immunoglobulin Repertoire Toolkit

Language: Perl - Size: 342 KB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 5 - Forks: 1

furkanmtorun/gnomad_python_api

🧬 gnomAD Python API is used to obtain data from gnomAD (genome aggregation database).

Language: Python - Size: 280 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 17 - Forks: 9

giffordlabcvr/ISGweb

Web application for querying data on interferon-stimulated genes (ISGs)

Language: Java - Size: 9.67 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

BioKIC/NEON-Biorepository-deprecated 📦

Development base for the NEON Biorepository Data Portal at Arizona State University

Language: PHP - Size: 127 MB - Last synced at: 11 months ago - Pushed at: about 2 years ago - Stars: 11 - Forks: 4

gkoulouras/seq-sec-ratio

A console application for the estimation of the primary and secondary structure's elements. Input should be the FASTA-formatted "ss.txt" file generated by PDB database.

Language: Visual Basic - Size: 812 KB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 3 - Forks: 0

jordanlab/stringMLST_datasets

stringMLST datasets

Size: 51.8 KB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 5 - Forks: 0

gabboraron/bevezetes_a_bioinformatikaba

Bevezetés a bioionformatikába

Language: Jupyter Notebook - Size: 965 KB - Last synced at: 15 days ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

furkanmtorun/GraphQL_API_in_Bioinformatics

Basic GraphQL API for an Example Bioinformatics Case (Flask + GraphQL with Ariadne)

Language: Python - Size: 315 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0

Amirreza-Mousavi/R_Meets_Uniprot

A short script for searching in Uniprot using RESTful APIs

Language: R - Size: 196 KB - Last synced at: 6 months ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

ifremer-bioinformatics/BeeDeeM-Tools

Sequence management tools relying on the Bioinformatics Databank Manager System, BeeDeeM (miror).

Language: Java - Size: 23 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

ssi-dk/bifrost-archive

Bacterial Surveillance platform, focused on QC in Denmark

Language: Python - Size: 1.99 MB - Last synced at: about 2 months ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 0

Ronlee12355/PHP_PROGRAMS

Those are my web project building by the language of PHP,CSS and JQuery

Language: HTML - Size: 98.5 MB - Last synced at: about 2 months ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 0