GitHub topics: biological-sequence-analysis
cogent3/cogent3
Comparative Genomics Toolkit 3
Language: Python - Size: 45.9 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 131 - Forks: 64
opendilab/DI-bioseq
Decision Intelligence platform for Biological Sequence Searching
Language: Python - Size: 95.4 MB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 115 - Forks: 1
omatheuspimenta/GRAMEP
GRAMEP - Genome vaRiation Analysis from the Maximum Entropy Principle
Language: Python - Size: 94.3 MB - Last synced at: 11 days ago - Pushed at: 4 months ago - Stars: 3 - Forks: 2
usadellab/prot-scriber
Assigns short human readable descriptions to biological sequences or gene families using references. For this, prot-scriber consumes sequence similarity search results in tabular format (Blast or Diamond).
Language: Rust - Size: 124 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 5 - Forks: 5
mirianfsilva/machine-learning-college-projects
Machine Learning college projects. Project I: Statistical Learning application. Project II: Deep Learning application using CNNs. Final Project: Biological Sequence Analysis using Profile HMM.
Language: Jupyter Notebook - Size: 6.53 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 1
Sarah-Hesham-2022/De-Bruijn-Graph-for-Genome-Assembly
Data Analysis for Genomics, De Bruijn Graph for Genome Assembly.
Language: Python - Size: 230 KB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0
Sarah-Hesham-2022/Euler-Path-for-Genome-Assembly
Data Analysis for Genomics, Euler Path for Genome Assembly.
Language: Python - Size: 2.93 KB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
Sarah-Hesham-2022/FASTQ_Files_Analysis
Data Analysis for Genomics, FASTQ File Structure and Analysis using Python.
Language: Python - Size: 547 KB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
Sarah-Hesham-2022/Computational-Biology-Position-Specific-Scoring-Matrices
Implementing Position Specific Scoring Matrix (PSSM) Algorithm using Python for computational biological tasks.
Language: Python - Size: 8.79 KB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
Sarah-Hesham-2022/BioPython-Getopt-Biological-Command-Line-Interpreter
Bio Python Project using getopt library in python and engaging with the command line prompt.
Language: Python - Size: 1.21 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0
pbagos/juchmme
Java Utility for Class Hidden Markov Models and Extensions
Language: Java - Size: 2.13 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 2
