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GitHub topics: ligand-receptor

saeyslab/nichenetr

NicheNet: predict active ligand-target links between interacting cells

Language: R - Size: 152 MB - Last synced at: 3 days ago - Pushed at: 6 days ago - Stars: 540 - Forks: 125

saezlab/liana-py

LIANA+: an all-in-one framework for cell-cell communication

Language: Python - Size: 272 MB - Last synced at: 8 days ago - Pushed at: 4 months ago - Stars: 206 - Forks: 25

saezlab/liana

LIANA: a LIgand-receptor ANalysis frAmework

Language: R - Size: 82.3 MB - Last synced at: 14 days ago - Pushed at: 10 months ago - Stars: 202 - Forks: 34

saeyslab/multinichenetr

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data

Language: HTML - Size: 686 MB - Last synced at: about 1 month ago - Pushed at: 5 months ago - Stars: 144 - Forks: 17

ZJUFanLab/CellTalkDB

A manually curated database of literature-supported ligand-receptor interactions in human and mouse

Language: R - Size: 18.5 MB - Last synced at: 5 days ago - Pushed at: 11 months ago - Stars: 30 - Forks: 5

jssweller/DrugHIVE

DrugHIVE: Structure-based drug design with a deep hierarchical generative model

Language: Python - Size: 372 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 58 - Forks: 7

saezlab/ccc_protocols

LIANA x Tensor-cell2cell Protocols

Language: Jupyter Notebook - Size: 168 MB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 3

VCCRI/scTalk

Intercellular communication analysis for scRNA-seq data

Language: R - Size: 5.36 MB - Last synced at: about 2 months ago - Pushed at: about 4 years ago - Stars: 6 - Forks: 1

stevexniu/scMatchmaker

Cell-Cell Interaction Discovery in Single Cell RNA Sequencing

Language: R - Size: 2.71 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 6 - Forks: 1

Amirreza-Mousavi/FjTAL_Virtual_Screening_QND

A quick and dirty virtual screening task for potential ligands of Flavobacterium johnsoniae Tyrosine Ammonia Lyase (FjTAL)

Language: Shell - Size: 349 KB - Last synced at: 8 months ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0