Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: ligand-receptor-interaction

kamilpytlak/DrugHunter

🧪DrugHunter - a web-based application for predicting the pharmacological activity of new drugs

Language: PureBasic - Size: 309 MB - Last synced: 5 days ago - Pushed: 5 days ago - Stars: 1 - Forks: 1

StatBiomed/SpatialDM

Spatial direct messaging detected by bivariate Moran

Language: Jupyter Notebook - Size: 53.1 MB - Last synced: 6 days ago - Pushed: about 1 month ago - Stars: 21 - Forks: 4

saeyslab/multinichenetr

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data

Language: HTML - Size: 619 MB - Last synced: 14 days ago - Pushed: 14 days ago - Stars: 91 - Forks: 14

multitalk/scCrossTalk

Infer and visualize cell-cell communication for single-cell RNA-seq data

Language: HTML - Size: 50.3 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 5 - Forks: 0

ZJUFanLab/SpaTalk

Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data

Language: R - Size: 9.71 MB - Last synced: 3 months ago - Pushed: 11 months ago - Stars: 46 - Forks: 14

fraMade/MD_ligand_receptor

MD-ligand-receptor is a bioinformatics pipeline written in Python for analyzing non-covalent ligand-receptor interactions in 3D structures starting from a molecular dynamic trajectory.

Language: Python - Size: 25.3 MB - Last synced: 5 months ago - Pushed: 12 months ago - Stars: 4 - Forks: 2

n-szulc/fingeRNAt

Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.

Language: Python - Size: 14.4 MB - Last synced: 10 months ago - Pushed: about 2 years ago - Stars: 24 - Forks: 6

inuritdino/COMMAP

Ligand-Receptor Interaction map based on scRNA-seq and pathway enrichment

Language: R - Size: 5.13 MB - Last synced: over 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 1

Related Keywords
ligand-receptor-interaction 8 cell-cell-communication 4 cell-cell-interaction 3 bioinformatics 3 scrna-seq 2 ligand-target 2 single-cell 2 single-cell-rna-seq 2 spatial-transcriptomics 2 structural-bioinformatics 2 drug-discovery 2 chemoinformatics 1 bioinformatics-tool 1 slurm 1 python 1 dna 1 drug-target-interactions 1 plotly-dash 1 mpi4py 1 parallel-computing 1 interactions 1 ligand-complex 1 molecular-interactions 1 nucleic-acids 1 rna 1 rna-ligand-complexes 1 scientific-computing 1 structural-interaction-fingerprint 1 pathway-enrichment 1 signaling-pathways 1 transcription-factors 1 transcriptomics 1 deep-learning 1 drug-modeling 1 machine-learning 1 pic50 1 qsar 1 streamlit 1 spatial-correlation 1 differential-expression 1 intercellular-communication 1 intercellular-signaling 1 ligand-receptor 1 systems-biology 1 single-cell-analysis 1 graph-network 1 knowledge-graph 1 spatial-data-analysis 1 spatially-resolved-transcriptomics 1 analysis 1 high-performance-computing 1 hpc-applications 1 molecular-dynamics 1