acvill/findMotifs

R script for finding and scoring motifs in small genomes using position-frequency tables

Language: R - Size: 1.73 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 1

Code-JL/DNA-Sequence-Analyzer

A robust Python-based bioinformatics tool for comprehensive DNA sequence analysis and manipulation.

Language: Python - Size: 7.81 KB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

VCG/vimo-sketches

A React component to sketch / search for network motifs.

Language: JavaScript - Size: 1.83 MB - Last synced at: 18 days ago - Pushed at: 10 months ago - Stars: 8 - Forks: 4

YogiOnBioinformatics/Teaching-Assistant-Computational-Genomics

Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.

Language: Shell - Size: 809 KB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 1

GiorgioMB/auto_dotmotif

Automatic Motif Detection wrapper for dotmotif

Language: Python - Size: 471 KB - Last synced at: 10 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

Gagniuc/Motif-detection-VB6

This application searches inside a text sequence for words that resemble those inside a list of similar words.

Language: Visual Basic 6.0 - Size: 8.69 MB - Last synced at: 5 months ago - Pushed at: over 2 years ago - Stars: 8 - Forks: 4

amirezzati/bioinformatics

Intro to Bioinformatics course contents

Language: Python - Size: 50.3 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

Gagniuc/A-high-discrimination-motif-scanner

This is a scanner designed to recognise DNA motifs within a long stretch of DNA. It uses two models for discrimination, one model representing the target and the second model representing the background.

Language: HTML - Size: 162 KB - Last synced at: about 2 months ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 0

kalyaniasthana/FindingHiddenMessagesInDNA_BioinformaticsI

Coding problems from course 1 of the Bioinformatics specialization

Language: Python - Size: 1.61 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

annapoorna-a-k/MOTIF-DISCOVERY_GIBBS-SAMPLER-using-python

Motif Finding using Gibbs Sampler

Language: Python - Size: 6.84 KB - Last synced at: 5 months ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 1

chuankaizhao/motifFinder-Bioinformatics

Language: Python - Size: 12.7 KB - Last synced at: almost 2 years ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0

jhramirezprado/RegEx_Motif_finder

Perl script to find sequences on multi fasta files that match a determined protein motif. The motifs are coded as a regular expression RegEx. Originally designed to search for fungal chitin synthase proteins.

Language: Perl - Size: 33.2 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

sebastianPsm/esp32_mass

Example implementation of "Mueen's Algorithm for Similarity Search" (aka MASS) for ESP32

Language: C - Size: 247 KB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 2 - Forks: 1

gayathrymw/Motif-Finding_Gibbs-Sampler

Motif Finding through Gibbs Sampling

Language: Python - Size: 5.86 KB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 1

kchu25/UnfoldCDL.jl

Deep Unfolded Convolutional Dictionary Learning for motif discovery.

Language: Julia - Size: 250 KB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 1

sunnyosun/DNAmotifScan

Scans TF binding sites based on motifs.

Language: Python - Size: 14.5 MB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 1

tksaha/motif-finding

Finding Network Motifs Using MCMC Sampling

Language: C++ - Size: 117 KB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 3 - Forks: 0