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GitHub topics: ms-data

OpenMS/OpenMS

The codebase of the OpenMS project

Language: C++ - Size: 629 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 519 - Forks: 358

OpenMS/pyopenms-docs

pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.

Language: Python - Size: 51.8 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 49 - Forks: 68

Nesvilab/philosopher

PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering

Language: Go - Size: 654 MB - Last synced at: 30 days ago - Pushed at: 30 days ago - Stars: 117 - Forks: 20

sirius-ms/sirius

SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)

Language: Java - Size: 162 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 105 - Forks: 29

MetaSys-LISBP/IsoCor

IsoCor: Isotope Correction for mass spectrometry labeling experiments

Language: Python - Size: 2.4 MB - Last synced at: 21 days ago - Pushed at: 3 months ago - Stars: 24 - Forks: 9

ursgal/ursgal

Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis

Language: Python - Size: 13.4 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 41 - Forks: 32

sirius-ms/sirius-libs 📦

sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java

Language: Java - Size: 48.1 MB - Last synced at: 7 months ago - Pushed at: 12 months ago - Stars: 51 - Forks: 25

AutoFlowResearch/SmartPeak

Fast and Accurate CE-, GC- and LC-MS(/MS) Data Processing

Language: C++ - Size: 203 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 39 - Forks: 13

MetaSys-LISBP/IsoQ

Simultaneous measurement of absolute metabolite concentration and isotope incorporation by mass spectrometry

Language: Python - Size: 2.22 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 1

pyQms/pyqms

pyQms, generalized, fast and accurate mass spectrometry data quantification

Language: Python - Size: 1.93 MB - Last synced at: 11 days ago - Pushed at: about 1 year ago - Stars: 28 - Forks: 9

glyXera/glyXtoolMS

🐍 Open-Source Software for the semi-automated analysis of glycopeptide mass spectrometry data

Language: Python - Size: 22.5 MB - Last synced at: 3 months ago - Pushed at: almost 7 years ago - Stars: 6 - Forks: 0

novak-jiri/cyclobranch

A tool for mass spectrometry data analysis.

Language: C++ - Size: 5.27 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 7 - Forks: 3