GitHub topics: peak-caller
macs3-project/MACS
MACS -- Model-based Analysis of ChIP-Seq
Language: Python - Size: 554 MB - Last synced at: 1 day ago - Pushed at: 10 days ago - Stars: 730 - Forks: 271
JetBrains-Research/span
SPAN Semi-supervised Peak Analyzer
Language: Kotlin - Size: 2.38 MB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 10 - Forks: 1
nolan-h-hamilton/ROCCO
Robust Open Chromatin Detection via Convex Optimization: Multisample Consensus Peak Calling
Language: Python - Size: 189 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 7 - Forks: 0
Boyle-Lab/F-Seq2
Improving the feature density based peak caller with dynamic statistics
Language: Python - Size: 16.8 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 6 - Forks: 0
metamaden/seq_answers
Sequencing data preprocessing
Language: R - Size: 1.44 MB - Last synced at: 11 months ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0
latur/RMA-Hunter
Web-based tool to systematically analyze and correct reference minor alleles in variant calling data
Language: HTML - Size: 83.6 MB - Last synced at: about 1 year ago - Pushed at: almost 8 years ago - Stars: 0 - Forks: 0
LiuLabUB/HMMRATAC
HMMRATAC peak caller for ATAC-seq data
Language: Java - Size: 65.6 MB - Last synced at: about 1 year ago - Pushed at: almost 3 years ago - Stars: 96 - Forks: 22
Xinglab/CLAM
CLIP-seq Analysis of Multi-mapped reads
Language: Python - Size: 1.05 MB - Last synced at: about 1 year ago - Pushed at: almost 4 years ago - Stars: 25 - Forks: 6
biocore-ntnu/epic
(DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER
Language: Python - Size: 10.7 MB - Last synced at: 7 months ago - Pushed at: over 6 years ago - Stars: 31 - Forks: 6
rhodesch/chip-seq
workflow for bulk chip-seq
Language: Shell - Size: 261 KB - Last synced at: about 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
mfansler/zinba Fork of SHZ66/zinba
Automatically exported from code.google.com/p/zinba
Language: C - Size: 106 MB - Last synced at: about 2 years ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 0
Biosoft-ru/cpics
ChIP-seq peak caller
Language: C - Size: 38.1 KB - Last synced at: about 2 years ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 0
