GitHub topics: variants
dbmi-bgm/granite Fork of bgm-cwg/novoCaller
A collection of software to work with genomic variants
Language: Python - Size: 46 MB - Last synced at: 26 days ago - Pushed at: 8 months ago - Stars: 6 - Forks: 0
shiquan/bcfanno
A fast and flexible program to annotate/interpret genetic variants in VCF/BCF file
Language: C - Size: 214 MB - Last synced at: 4 months ago - Pushed at: over 4 years ago - Stars: 17 - Forks: 4
Clinical-Genomics/patientMatcher
A MatchMaker Exchange server
Language: Python - Size: 27.5 MB - Last synced at: 10 days ago - Pushed at: 8 months ago - Stars: 11 - Forks: 6
flekschas/enhancer-gene-vis
A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.
Language: TypeScript - Size: 39.6 MB - Last synced at: 2 days ago - Pushed at: about 2 years ago - Stars: 12 - Forks: 4
ngs-fzb/MTBseq_source
MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.
Language: Perl - Size: 194 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 40 - Forks: 22
techdivision/import-product-variant-ee
Pacemaker library providing basic Magento 2 EE configurable product import functionality
Language: PHP - Size: 69.3 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 2
techdivision/import-product-variant
Pacemaker library providing basic Magento 2 configurable product import functionality
Language: PHP - Size: 213 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 2
pedro-mendonca/GP-Automatic-Variants
Plugin for @GlotPress to manage automatic converted variants.
Language: PHP - Size: 2.66 MB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
mnot/variants-toy 📦
Proving the algorithms in draft-nottingham-variants
Language: Python - Size: 17.6 KB - Last synced at: 10 months ago - Pushed at: over 6 years ago - Stars: 4 - Forks: 0
inkerton/Ethan_portfolio
Next.js demo portfolio
Language: JavaScript - Size: 2.85 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0
G3viz/g3lollipop.js
Lollipop-diagram to visualize genomic mutations
Language: JavaScript - Size: 10.8 MB - Last synced at: 10 months ago - Pushed at: over 5 years ago - Stars: 19 - Forks: 13
UofS-Pulse-Binfo/nd_genotypes
Drupal/Tripal: Tripal interface for Chado Natural Diversity Genotypic data.
Language: PHP - Size: 6.58 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 4 - Forks: 1
EUCANCan/prepy-wrapper
Wrapper for pre.py from Illumina's hap.py package. It is used to preprocess VCF files in order to normalize SNVs and indels for downstream analysis.
Language: Python - Size: 25.4 KB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
jdconner/styled-variants
A scalable styled-component theming system that fully leverages JavaScript as a language for styles authoring and theming at both local and global levels.
Language: JavaScript - Size: 130 KB - Last synced at: 24 days ago - Pushed at: about 5 years ago - Stars: 20 - Forks: 1
gitfu/manifesto
Manifesto is an HLS tool for creating multiple variants, a master.m3u8 file, and converting 608 captions to segmented webvtt subtitles via ffmpeg.
Language: Go - Size: 73.2 KB - Last synced at: about 1 month ago - Pushed at: over 7 years ago - Stars: 18 - Forks: 2
sfbizzari/gnomADv4-Batch-tool-pythonAPI Fork of broadinstitute/gnomad-browser
Using gnomad-browser's GraphQL updated API to retrieve total joint allele frequencies, exome/genome allele frequencies and homozygote counts as well as population specific numbers for a batch of variants.
Language: Python - Size: 38.1 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0
Jackardios/react-tailwind-variants
React Stitches-like variants API for tailwindcss classes
Language: TypeScript - Size: 160 KB - Last synced at: 23 days ago - Pushed at: about 2 years ago - Stars: 17 - Forks: 1
Julian-Theis/AVATAR
AdVersarial system vArianT AppRoximation - A novel method to measure the generalization of process models
Language: Python - Size: 757 KB - Last synced at: 12 months ago - Pushed at: over 2 years ago - Stars: 5 - Forks: 2
bigbio/pgt-pangenome
Protegenomics analysis based on Pangenome references
Language: Jupyter Notebook - Size: 595 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0
Hansi-Thewarapperuma/Inherited_Risk_Detector
Identification of cancer-causing variants
Language: Python - Size: 7.74 MB - Last synced at: 12 months ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
BIGCS-Lab/GDBIGtools
GDBIGtools: A command line tools for GDBIG varaints browser
Language: Python - Size: 451 KB - Last synced at: 19 days ago - Pushed at: 7 months ago - Stars: 6 - Forks: 2
ShujiaHuang/cmdbtools
Command line tools for CMDB varaints browser
Language: Python - Size: 1.48 MB - Last synced at: 21 days ago - Pushed at: about 1 year ago - Stars: 23 - Forks: 7
rafalopespx/covidtrackerct Fork of duckien242/covidtrackerct
ShinyApp repo for the CovidTracker, any details further than the codes here available please send an email to rafael.lopes at yale.edu
Language: R - Size: 103 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
opentargets-archive/postgap-api 📦
A GraphQL API for serving POSTGAP data
Language: JavaScript - Size: 3.4 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0
kantale/MutationInfo
Tool to retrieve location information of genetic variants
Language: Jupyter Notebook - Size: 386 KB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 6 - Forks: 3
MI2DataLab/crs19-monitor
Monitor of SARS-CoV-2 variants and mutations
Language: CSS - Size: 14.3 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 6
seandavi/precision_oncology_variant_resources_manuscript
Files for manuscript Resources for Interpreting Variants in Precision Genomic Oncology Applications
Language: TeX - Size: 551 KB - Last synced at: about 1 month ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
codebayu/style-variants
The Package for creating dynamic and reusable styles in React Native
Language: TypeScript - Size: 233 KB - Last synced at: 6 days ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
BCCDC-PHL/type-variants-nf
Detect SARS-CoV-2 variants using outputs from the ncov2019-artic-nf pipeline
Language: Python - Size: 21.5 KB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0
gatk-workflows/gatk4-somatic-snvs-indels 📦
This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are also organized in Dockstore in the GATK Best Practices Workflows collection.
Language: wdl - Size: 151 KB - Last synced at: 10 months ago - Pushed at: about 5 years ago - Stars: 76 - Forks: 42
anuragraj/PgxSAVy
A tool for quality control and annotation of variant peptides after FDR in proteogenomics
Language: Perl - Size: 1.98 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
paarthenon/kind-of-super
A demo project for Variant
Language: TypeScript - Size: 229 KB - Last synced at: about 1 year ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 0
JollyGrin/unbrewed-decks-ssg
Static Site Generation for unbrewed deck selector. Shouldn't call the api every time.
Language: CSS - Size: 13.4 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
G3root/react-cva
Class Variance Authority helper for react
Language: TypeScript - Size: 116 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 19 - Forks: 1
miniwinwm/miniwinwm
Open source embedded window manager with overlapped windows. This project is actively maintained and free support is provided via the website. New features can be added on request. Consultancy can provided for commercial use.
Language: C - Size: 149 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 33 - Forks: 3
XuewenWangUGA/VarSeqStitcher
A novel bioinformatics tool in Java to build phased long alleles of STR+SNP+InDel from VCF file
Language: HTML - Size: 91.7 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
umccr/vcf_stuff
📊Evaluating, filtering, comparing, and visualising VCF
Language: Jupyter Notebook - Size: 40.3 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 26 - Forks: 3
andrejewski/tagmeme
Simple tagged unions
Language: JavaScript - Size: 96.7 KB - Last synced at: 5 days ago - Pushed at: about 5 years ago - Stars: 20 - Forks: 1
sigven/gvanno
Generic human DNA variant annotation pipeline
Language: Python - Size: 13.7 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 44 - Forks: 11
3dgiordano/SARS-CoV-2-Variants
This project tries to give a glimpse of the different variants of SAR-CoV-2 in the world.
Language: Python - Size: 395 MB - Last synced at: 22 days ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 2
vitorlinsbinski/dashboard-with-tailwind
A dashboard to learn about Tailwind CSS, which is a utility-first CSS framework that simplifies web development by offering a collection of pre-designed utility classes.
Language: TypeScript - Size: 505 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
c-j-lh/wraparound-reversi
wraparound reversi, a reversi variant, with a terminal and discord bot interface. Bots available include MCTS and greedy heuristics.
Language: Python - Size: 53.7 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
lifeomic/spark-vcf
Spark VCF data source implementation for Dataframes
Language: Scala - Size: 314 KB - Last synced at: 8 days ago - Pushed at: almost 3 years ago - Stars: 14 - Forks: 2
quinlan-lab/pathoscore
pathoscore evaluates variant pathogenicity tools and scores.
Language: Python - Size: 158 KB - Last synced at: about 1 month ago - Pushed at: about 3 years ago - Stars: 21 - Forks: 8
danymukesha/ensembl-variant-lookup
Python tool built for a user-friendly interface for searching individual variants, batch queries, and exploring gene regions from the Ensembl database.
Language: Python - Size: 26.7 MB - Last synced at: 21 days ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
SMFTricks/Bluez
Nice blue theme with CSS3 and color variants
Language: PHP - Size: 471 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
brunocodutra/alloy
Embrace (post) modern C++
Language: C++ - Size: 298 KB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 9 - Forks: 1
cccnrc/plot-VCF
visual analysis of your VCF files
Language: R - Size: 75.9 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 12 - Forks: 2
agduncan94/civicr
An R package for interacting with the CIViC API
Language: R - Size: 187 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
nbroguiere/burgertools
Bundle of Useful scRNA-seq Gating Tools Extending seuRat
Language: R - Size: 43.9 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0
Jackardios/react-classname-variants
Stitches-like styled components with plain class names
Language: TypeScript - Size: 236 KB - Last synced at: 15 days ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0
StarLederer/unocss-preset-mini-variants
Variants from @unocss/preset-mini
Language: TypeScript - Size: 68.4 KB - Last synced at: about 4 hours ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 1
striezl/VariScan
Fast scan of SAP ABAP program variants
Language: ABAP - Size: 184 KB - Last synced at: 10 months ago - Pushed at: almost 4 years ago - Stars: 14 - Forks: 1
danesparza/feature
:seedling: Feature flag helpers for .NET
Language: C# - Size: 55.7 KB - Last synced at: about 14 hours ago - Pushed at: about 7 years ago - Stars: 7 - Forks: 3
jdgabriel/masterclass-nextjs-tailwind
Repository for study tailwind. components variants.
Language: TypeScript - Size: 579 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
jonasraoni/csharp-variant-type
A class that mimics the behavior of the so-called variant data type.
Language: C# - Size: 3.91 KB - Last synced at: about 2 months ago - Pushed at: over 7 years ago - Stars: 3 - Forks: 1
B00merang-Project/Windows-10-Dark
Dark variant of Windows 10 theme
Language: CSS - Size: 3.67 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 270 - Forks: 35
dvmorozov/fitminimizers
Downhill Simplex for Delphi, Lazarus.
Language: Pascal - Size: 49.9 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 4
o-netusa/cppbase
Header-only cross-platform C++17 library providing common features for C++ projects
Language: C++ - Size: 32.3 MB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 0
JAndrassy/my_boards
My Arduino boards custom variants. You can use it as starting point for your boards specialities.
Language: C++ - Size: 7.47 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 15 - Forks: 1
VariantEffect/mavevis
visualization for MaveDB
Language: R - Size: 544 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 3
zhanxw/rvtests
Rare variant test software for next generation sequencing data
Language: C++ - Size: 32.7 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 120 - Forks: 41
wingolab-org/pecaller
map and call next generation genomic sequencing
Language: C - Size: 226 KB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 8 - Forks: 3
ngs-fzb/binoSNP
:mag: :pill: Detection of low-frequency SNPs in next-generation sequencing data of Mycobacterium tuberculosis complex strains
Language: Perl - Size: 1.43 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 1
modupeore/VAP
VAP : For Reference mapping and Variant detection.
Language: Perl - Size: 21.5 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 4
luntergroup/bamsplit
Split a BAM file by haplotype support
Language: Python - Size: 43.9 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 15 - Forks: 1
danoreper/ISVdb
Code to support 'Inbred Strain Variant Database (ISVdb): A Repository for Probabilistically Informed Sequence Differences Among the Collaborative Cross Strains and Their Founders' (Daniel Oreper, Yanwei Cai, 2017)
Language: Python - Size: 7.29 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 1
AntoineHo/CASH
Compare and shuffle heterozygosity using BED and VCF files
Language: Python - Size: 265 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0
ahalfpen727/VariantAnalysisScripts
Several variant analysis workflows for different types of sequencing data
Language: R - Size: 12.5 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
sawsanowa/Sentiment-Analysis-of-COVID-19-Vaccination-in-Saudi-Arabia
Studying people perception regarding COVID-19 vaccination in Saudi Arabia during selected events
Language: Jupyter Notebook - Size: 9.67 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 1
IARCbioinfo/needlestack
Multi-sample somatic variant caller
Language: R - Size: 49.8 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 46 - Forks: 14
PeltzLab-Stanford/mMap
Computational tool for prioritizing the genetic candidates based on the protein functional and regulatory features
Language: Python - Size: 7.38 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 1
humanlongevity/HLA
xHLA: Fast and accurate HLA typing from short read sequence data
Language: Jupyter Notebook - Size: 91.3 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 92 - Forks: 51
nestornotabilis/Genetic-Mechanisms-in-Duodenal-Polyposis
A collection of scripts documenting the parameter settings used to apply variant discovery to the exploration of Duodenal Polyposis.
Language: Perl - Size: 27.3 KB - Last synced at: over 1 year ago - Pushed at: over 8 years ago - Stars: 0 - Forks: 0
nriddiford/svParser
Explore and filter structural variant calls from Lumpy and Delly VCF files
Language: Perl - Size: 4.07 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 8 - Forks: 1
mehdimerbah/WES
Whole Exome Sequencing end-to-end pipeline. Starting from whole exome fastq files: Data QC, Adapter Trimming, Reference Genome Alignment, SAM/BAM Validation, Data Recalibration and Variant Calling.
Language: HTML - Size: 4.2 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 0
furkanmtorun/gnomad_python_api
🧬 gnomAD Python API is used to obtain data from gnomAD (genome aggregation database).
Language: Python - Size: 280 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 17 - Forks: 9
griffithlab/civic-client
Web client for CIViC: Clinical Interpretations of Variants in Cancer
Language: JavaScript - Size: 28 MB - Last synced at: 13 days ago - Pushed at: over 1 year ago - Stars: 50 - Forks: 27
1to9only/SukakuExplainer
SukakuExplainer is my modifications to SudokuExplainer to also solve pencilmark sudoku (sukaku)
Language: Java - Size: 563 KB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 0
bio-comp/vannotator
Vannatator
Language: Python - Size: 14.6 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
robertopreste/mitoviz
Python package to plot variants on the human mitochondrial genome.
Language: Python - Size: 82.7 MB - Last synced at: 18 days ago - Pushed at: 6 months ago - Stars: 2 - Forks: 0
SherineAwad/AssociationAnalysis
Rare variants association analysis tests is not only burden test. There are lots of test we can use.
Language: Python - Size: 6.84 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
onekin/WacLine
WacLine is a software product line that allows configuration and derivation of web annotation browser extensions for specific domains using pure::variants
Language: JavaScript - Size: 35.3 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 8 - Forks: 6
marquescruz/covid19-contact-tracing-cases-simulation
Simulation of COVID-19 cases arising from high-risk contacts
Language: R - Size: 43 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
pledra/odoo-product-configurator 📦
Odoo modules enabling dynamic product configuration
Language: Python - Size: 4.87 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 104 - Forks: 141
sergomet/product-variants
product-variants
Language: PHP - Size: 2.93 KB - Last synced at: almost 2 years ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0
manojmw/MultiOmics-ExomeSeq-Phenotype
Main Repository for my MASTER'S THESIS PROJECT
Language: Python - Size: 4.48 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
tanaymukherjee/A-B-Testing-in-R
A/B testing (or split-testing) is a randomized experiment with two variants A and B. It includes application of statistical hypothesis testing (or two-sample hypothesis testing), as used in the field of statistics. A/B testing is a way to compare two versions of a single variable, typically by testing a subject's response to variant A against variant B, and determining which of the two variants is more effective.
Language: R - Size: 5.86 KB - Last synced at: almost 2 years ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 0
Computational-Rare-Disease-Genomics-WHG/VuTR
Web app to visualise the consequences of high-impact 5' UTR Variants
Language: JavaScript - Size: 218 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 0
alexgaudiosi/Multify
Ideal for Shopify wholesalers to allow users to order multiple variants of a product simultaneously using one form table.
Language: Liquid - Size: 20.5 KB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 8 - Forks: 3
bio-ontology-research-group/phenomenet-vp
A phenotype-based tool for variant prioritization in WES and WGS data
Language: Java - Size: 6.53 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 34 - Forks: 13
ccheptea/auto-value-variant
AutoValue extension to easily determine variants for objects with known properties
Language: Java - Size: 90.8 KB - Last synced at: almost 2 years ago - Pushed at: about 8 years ago - Stars: 5 - Forks: 0
JCGonzS/mechnetor
Mechnetor (Mechanistic Networks Explorer) is a web tool that lets you quickly explore and visualize integrated protein mechanism data, enabling a better understanding of the functional context of genetic variants.
Language: JavaScript - Size: 3.44 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 0
AndiH/CUDA-Fortran-STREAM
Variant of STREAM Benchmark in CUDA Fortran
Language: Fortran - Size: 22.5 KB - Last synced at: 2 months ago - Pushed at: over 8 years ago - Stars: 1 - Forks: 1
jerry1993-tech/xbert
基于tensorflow2.x实现bert及其变体的预训练模型加载架构
Language: Python - Size: 2.76 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 15 - Forks: 0
vtechguys/vs
A first-class typed styling variant API.
Language: JavaScript - Size: 16.6 KB - Last synced at: 22 days ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
adamd3/VarPredict
A command line tool for predicting gene expression using genotypic data
Language: Python - Size: 2.15 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
TNTurnerLab/acorn
acorn is an R package that examines various features of de novo variants including subsetting DNVs by individual, variant type, or genomic region; calculating features including variant change counts, lengths, and presence/absence at CpG sites; and characteristics of parental age and number of DNVs.
Language: R - Size: 17 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 3 - Forks: 0
a-thind/IBDVar
A tool for prioritising identity-by-descent (IBD) variants in Whole Genome Sequencing (WGS) data from families with rare heritable diseases.
Language: Shell - Size: 4.79 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0
yasaichi/actionview-consistent_fallback
:leftwards_arrow_with_hook: Consistent fallback to the default layout and partials for Action View
Language: Ruby - Size: 43 KB - Last synced at: 1 day ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0
