Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: featurecounts
bixBeta/atac
nextflow ATACseq pipeline for GG02
Language: Nextflow - Size: 399 KB - Last synced: 4 days ago - Pushed: 5 days ago - Stars: 1 - Forks: 0
monnieb92/PROseq_Intron_Intergenic_Enhancers
A pipeline to call intron and intergenic eRNAs from PRO-seq Data
Language: Shell - Size: 35.2 KB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
hanielcedraz/BAQCOM
Quality Control, Mapping and Reads Count for RNA-Seq Analysis
Language: R - Size: 102 MB - Last synced: 7 months ago - Pushed: about 2 years ago - Stars: 7 - Forks: 1
vivekbhr/Subread_to_DEXSeq
Scripts to import your FeatureCounts output into DEXSeq
Language: Python - Size: 937 KB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 27 - Forks: 19
Pinky-cloud224/snakemake_workflow_rna_seq_data_analysis
Language: Jupyter Notebook - Size: 975 KB - Last synced: 5 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0
bpucker/RNA-Seq_analysis
scripts for RNA-Seq analysis
Language: Python - Size: 89.8 KB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 16 - Forks: 8
mattgalbraith/subread-docker-singularity
Build Docker container for Subread package and (optionally) convert to Apptainer/Singularity.
Language: Dockerfile - Size: 4.88 KB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
rnnh/bioinfo-notebook
🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
Language: Shell - Size: 1010 KB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 77 - Forks: 29
furkanmtorun/rna-seq-workflow 📦
🛠under active development | RNA-Seq Workflow in Jupyter Notebook
Language: Jupyter Notebook - Size: 30.3 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 3 - Forks: 1
hernanmd/hisat2_bovine
Scripts to index and align Bovine genome with HISAT2
Language: Shell - Size: 13.3 MB - Last synced: 24 days ago - Pushed: about 6 years ago - Stars: 1 - Forks: 1
uhh-lt/lefex
A tool for extraction of lexical features from text based on UIMA and MapReduce
Language: Java - Size: 342 KB - Last synced: about 1 month ago - Pushed: almost 6 years ago - Stars: 4 - Forks: 0
