GitHub topics: flowcytometry
UCLouvain-CBIO/MDSvis
Interactive exploring Multi Dimensional Scaling projections
Language: R - Size: 4.41 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 0 - Forks: 0
khasrawlab/TILproject
Uncovering Determinants of TIL Expansion in High-Grade Gliomas through Immunophenotyping, TCR Profiling, Single-Cell, Spatial Transcriptomics, and Proeteomics
Language: R - Size: 121 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 0 - Forks: 0
saeyslab/FlowSOM_Python
The complete FlowSOM package known from R, now available in Python!
Language: Python - Size: 18.5 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 17 - Forks: 5
pritampanda15/Proteomics
Flow Cytometry analysis in R | Proteomics
Language: HTML - Size: 48.3 MB - Last synced at: 2 days ago - Pushed at: 5 months ago - Stars: 2 - Forks: 0
mhbsiam/cafe
Cell Analyzer for Flow Experiment
Language: Python - Size: 4.68 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 2 - Forks: 0
himsr-lab/CU-HIMSR
A collection of tools provided by HIMSR
Language: Python - Size: 469 KB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
rmassei/2024_flowcitometry_multichannel
An integrative workflow to extract single images from flow citometry files and create multichannel ome.tiff images
Language: Jupyter Notebook - Size: 254 KB - Last synced at: 12 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
Menno-Meijer/T-cell-subsets-neural-network
This neural-network can predict the effector/memory T cell (T lymphocyte) subset of single cells based on flow cytometry data with 99,22% accuracy.
Language: Jupyter Notebook - Size: 2.19 MB - Last synced at: about 1 year ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0
yunzhang813/HVP-Innovation-Award-2019
Reporting page of the HVP Innovation Award 2019
Size: 5.5 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
luglilab/Cytophenograph
Pipeline for flow cytometry anlaysis
Language: Python - Size: 363 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0
CaRniFeXeR/self_explainable_transformerflow
Official implementation of Towards Self-Explainable Transformers for Cell Classification in Flow Cytometry Data
Language: Python - Size: 85.9 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 2
nicholascwho/TTE
Code used to analyze and produce figures during tenure in the Translational Tumor Engineering Lab
Language: R - Size: 53.7 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
UcarLab/mice-aging-project
Code for Karakaslar, Katiyar et al., Aging Cell 2023
Language: HTML - Size: 14 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 1
semontante/flowSim
R package to identify and remove redundant information in bivariate flow cytometry data, in order to improve the quality of the training sets for machine learning algorithms.
Language: R - Size: 194 MB - Last synced at: 5 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
sriramsrikant/ABC-selectivity 📦
These are iPython notebooks used for analysis in my 2019 ABC-selectivity paper.
Language: Jupyter Notebook - Size: 4 MB - Last synced at: almost 2 years ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
niaid/HDStIM
HDStIM: High Dimensional Stimulation Immune Mapping
Language: R - Size: 42.3 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0
bpollner/flowdex
Extract Fluorescence Distribution Data From FCS Files And Recalculate To Events Per Volume
Language: R - Size: 8.59 MB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
4DtyU/R-scripting-samples_AnnaBird
Example code supporting immunology research
Language: HTML - Size: 11 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
ivanp1994/GuavaMuseFCS
Code for GUI visualization of data, for import of GuavaMuse .FCS files, for flow cytometry style gating, and for calculating enrichment and depletion after a given procedure.
Language: Python - Size: 4.16 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
PLAIT-Project/AnonymizationTool
Anonymization app for project Phenotyping Lymphoma with an Artificial Intelligence Toolbox (PLAIT) based on R shiny; access website and AI via eduroam
Language: C++ - Size: 5.35 MB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 1
achillobator/TPL_Structure_Function
A collection of code used to analyze flow cytometry and root density data
Language: R - Size: 20.5 KB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
