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GitHub topics: hybseq-data

tomas-fer/HybPhyloMaker

Bash scripts for analysis of Hyb-Seq data (from raw reads to species trees/networks)

Language: Shell - Size: 204 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 19 - Forks: 9

V-Z/hybseq-scripts

Set of scripts to process HybSeq target enrichment HTS data (on computing grids).

Language: Shell - Size: 2.33 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 4 - Forks: 3

V-Z/hybseq-course

Materials for course about processing HybSeq data on computing grids

Language: TeX - Size: 1.63 MB - Last synced at: 9 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

V-Z/sondovac

Sondovač is a script to create orthologous low-copy nuclear probes from transcriptome and genome skim data for target enrichment. For latest version check "releases".

Language: TeX - Size: 14.4 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 5 - Forks: 2

Related Keywords
hybseq-data 4 phylogenomics 3 data-analysis 3 bioinformatics 3 bioinformatics-analysis 3 ngs-pipeline 2 ngs 2 molecular-biology 2 metacentrum 2 data-science 2 bioinformatics-scripts 2 bioinformatics-pipeline 2 species-tree 2 phylogenomics-pipeline 2 scripting 1 phylogenetic-trees 1 shell-scripting 1 species-trees 1 terminal 1 learning 1 grid-computing 1 locus-selection 1 genetics 1 ngs-analysis 1 orthologues 1 phylogenetics 1 phylogenomic 1 pipeline 1 science 1 taxonomic-classification 1 transcriptome 1 phylogenetic-networks 1 plastome 1 target-enrichment 1 alignments 1 gene-tree 1 genomics 1 hybpiper 1 hybseq-scripts 1 ngs-scripts 1 paralogs 1 bash-script 1 bioinformatics-data 1 command-line-tool 1 computing 1 course 1 data-analyses 1