GitHub topics: mitochondrial
caleblareau/mgatk
mgatk: mitochondrial genome analysis toolkit
Language: Python - Size: 135 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 104 - Forks: 29
linzhi2013/MitoZ
MitoZ: A toolkit for assembly, annotation, and visualization of animal mitochondrial genomes
Language: Shell - Size: 219 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 115 - Forks: 39
lirepo/MLIA
Mitochondrial Long-read Iterative Assembly
Language: Python - Size: 23.4 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 2 - Forks: 1
Runsheng/mitovar
Mitochondrial DNA sequence assembly and annotation for nematodes using NGS data.
Language: Python - Size: 2.68 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 2
BFL-lab/Mfannot
MFannot is a program for the annotation of mitochondrial and plastid genomes
Language: Perl - Size: 1.01 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 12 - Forks: 5
filcfig/PCP
PrecisionCallerPipeline (PCP) automatically takes Precision ID mtDNA Whole Genome Panel (Thermo Fisher Scientific, USA) FASTQ files and outputs BAM files correctly aligned to the rCRS.
Language: Shell - Size: 6.45 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
quxiaojian/get_cp_and_mt_genes_from_contigs_of_genome-skimming_or_transcriptome_data
get chloroplast and mitochondrial genes from contigs of genome-skimming or transcriptome data
Language: Perl - Size: 28.3 KB - Last synced at: 4 months ago - Pushed at: about 4 years ago - Stars: 3 - Forks: 0
Nirmal2310/Mitochondrial_Benchmarking_study
This repository contains the codes and additional data utilized in the benchmark study of short read based mitochondrial assemblers for human datasets
Language: R - Size: 209 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
quxiaojian/OGA
Organelle Genome Assembler
Language: Perl - Size: 14.3 MB - Last synced at: 4 months ago - Pushed at: over 3 years ago - Stars: 9 - Forks: 2
dzhang32/ATG7_RNAseq
Analysis of rare disease patients with ATG7 mutations
Language: HTML - Size: 13.5 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
aurora-mareviv/mthapower
Sample size and power for association studies involving mitochondrial DNA haplogroups -
Language: R - Size: 838 KB - Last synced at: 27 days ago - Pushed at: almost 6 years ago - Stars: 3 - Forks: 0
fangpin/mit6.828
mit6.828
Language: C - Size: 5.86 KB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 0
chop-dbhi/mcmanus_ant1
RNA-Seq analysis for "Mitochondrial DNA Variation Dictates Expressivity and Progression of Nuclear DNA Mutations Causing Cardiomyopathy"
Language: HTML - Size: 15.5 MB - Last synced at: 2 days ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 1
