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GitHub topics: mycobacterium-bovis

USDA-VS/vSNP3

vSNP -- validate SNPs

Language: Python - Size: 5.85 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 11 - Forks: 2

kerrimalone/M.bovis-AF2122-genome-update

Updated Reference Genome Sequence and Annotation of Mycobacterium bovis AF2122/97

Language: Shell - Size: 5.86 KB - Last synced at: 11 months ago - Pushed at: almost 8 years ago - Stars: 0 - Forks: 0

MaryAgopian/Variant_Barcoding_M.orygis

Variant barcoding pipeline using single nucleotide polymorphisms (SNPs) for the generation of M. orygis standardised markers for diagnostic and epidemiological use.

Language: R - Size: 55.7 KB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

Related Keywords
mycobacterium-bovis 3 mycobacterium-tuberculosis-complex 3 genomics 2 tuberculosis 2 mycobacterium-bovis-af2122 2 genome-update 1 illumina-sequencing 1 pacbio 1 reference-genome 1 bacterial 1 bacterial-genome-analysis 1 bacterial-genomes 1 bioinformatics 1 bioinformatics-pipeline 1 genomic-data-analysis 1 genomic-data-science 1 genomics-visualization 1 microbial-genomes 1 microbiology 1 mycobacterium-orygis 1 mycobacterium-tuberculosis 1 genome-assembly 1 de-novo-assembly 1 whole-genome-sequencing 1 wgs 1 vcf-files 1 snps 1 sars-cov-2 1 pipeline 1 phylogenetics 1 influenza 1 high-throughput-sequencing 1 freebayes 1 bwa-mem 1 brucella 1 bam-files 1 analysis-pipeline 1