Ecosyste.ms: Repos

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GitHub topics: nucleotide

web-based protein structure viewer and analysis tool interactively or in batch mode

Language: JavaScript - Size: 390 MB - Last synced: 4 days ago - Pushed: 4 days ago - Stars: 144 - Forks: 42

Needleman–Wunsch algorithm implementation in Lua.

Language: Lua - Size: 30.3 KB - Last synced: 15 days ago - Pushed: 21 days ago - Stars: 0 - Forks: 0

Scripts, analysis code, input data, and intermediate files for response to Soni et al.

Language: R - Size: 32 MB - Last synced: 25 days ago - Pushed: 25 days ago - Stars: 1 - Forks: 0

Python wrapper created to help download metagenomic data from SRA or ENA databases

Language: Python - Size: 273 KB - Last synced: 26 days ago - Pushed: over 1 year ago - Stars: 2 - Forks: 0

🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

Language: Python - Size: 4.05 MB - Last synced: 27 days ago - Pushed: 27 days ago - Stars: 377 - Forks: 45

Needleman–Wunsch algorithm implementation in Go.

Language: Go - Size: 12.7 KB - Last synced: 15 days ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0

Seamless Integration of BLAST Sequence Searches in R

Language: R - Size: 656 KB - Last synced: about 2 months ago - Pushed: 8 months ago - Stars: 31 - Forks: 8

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

Language: Perl - Size: 876 KB - Last synced: 7 months ago - Pushed: 9 months ago - Stars: 92 - Forks: 37

This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).

Language: Python - Size: 2.09 MB - Last synced: 7 months ago - Pushed: about 5 years ago - Stars: 15 - Forks: 5

DNA nucleotide count

Language: Shell - Size: 8.79 KB - Last synced: 12 months ago - Pushed: 12 months ago - Stars: 0 - Forks: 0

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