Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: phylip

Goalign is a set of command line tools and an API to manipulate multiple sequence alignments. It is implemented in Go language.

Language: Go - Size: 1.45 MB - Last synced: about 17 hours ago - Pushed: about 1 month ago - Stars: 62 - Forks: 8

API to read, write, and filter DNA sequence alignment files

Language: Python - Size: 108 MB - Last synced: 28 days ago - Pushed: 28 days ago - Stars: 2 - Forks: 1

Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis

Language: Python - Size: 136 KB - Last synced: 7 months ago - Pushed: 11 months ago - Stars: 232 - Forks: 80

Python script to add population identifiers to STRUCTURE, PLINK, and PHYLIP files

Language: Python - Size: 50.8 KB - Last synced: 7 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 1

Easy Manipulation of Multiple Sequence Alignments (Concatenation and Format Conversion)

Language: Python - Size: 1.08 MB - Last synced: 7 months ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 1

A nextflow pipeline which executes treemix on a population of interest

Language: Nextflow - Size: 111 KB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 0 - Forks: 0

File conversion scripts for DNA sequence data

Language: Python - Size: 55.7 KB - Last synced: about 1 year ago - Pushed: about 3 years ago - Stars: 2 - Forks: 1

Repository with Phylip 3.697 with binaries for Apple Silicon

Language: C - Size: 7.28 MB - Last synced: about 1 year ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

Python script to generate .snp and .ind Eigenstrat files from a PHYLIP infile

Language: Python - Size: 238 KB - Last synced: 7 months ago - Pushed: about 6 years ago - Stars: 2 - Forks: 1

MBEToolbox: Matlab toolbox for molecular evolution

Language: C - Size: 5.18 MB - Last synced: 7 months ago - Pushed: over 4 years ago - Stars: 3 - Forks: 3

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