GitHub topics: vasculature
psweens/Vascular-TDA
Software to analyse the topology of vascular networks.
Language: Python - Size: 5.33 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 9 - Forks: 0
psweens/V-System
A project to create synthetic vascular networks utilising L-Systems.
Language: Python - Size: 1.32 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 17 - Forks: 4
BlueBrain/BioExplorer
The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration
Language: C++ - Size: 444 MB - Last synced at: 14 days ago - Pushed at: 7 months ago - Stars: 65 - Forks: 10
BlueBrain/Ultraliser
Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight inputs, segmented masks, skeletons of NGV morphologies and volumes.
Language: C++ - Size: 9.7 MB - Last synced at: 18 days ago - Pushed at: 5 months ago - Stars: 28 - Forks: 5
sinAshish/TreeDiffusion
[MICCAI 2024] TrIND: Representing Anatomical Trees by Denoising Diffusion of Implicit Neural Fields
Language: Python - Size: 27.1 MB - Last synced at: about 15 hours ago - Pushed at: 12 months ago - Stars: 5 - Forks: 0
cns-iu/hra-sennet-hoa-kaggle-2024
Code for "Vasculature segmentation in 3D hierarchical phase-contrast tomography images of human kidneys"
Language: Jupyter Notebook - Size: 14.5 MB - Last synced at: about 2 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 2
sfu-mial/TreeDiffusion
Official Code for "Representing Anatomical Trees by Denoising Diffusion of Implicit Neural Fields"
Language: Python - Size: 35.5 MB - Last synced at: about 15 hours ago - Pushed at: 11 months ago - Stars: 2 - Forks: 0
ElisabethKugler/ZFVascularQuantification
#ZVQ - Zebrafish Vascular Quantification - https://doi.org/10.1242/dev.199720
Language: ImageJ Macro - Size: 3.14 MB - Last synced at: 25 days ago - Pushed at: about 2 years ago - Stars: 10 - Forks: 0
ltedgar-ed/flow_idealised_ISV_network
Network flow model of the zebrafish trunk vasculature (Control and Wasp Mutant data included) as part of the study presented by Rosa et. al. 2022 (https://journals.biologists.com/dev/article/149/3/dev200195/274169)
Language: MATLAB - Size: 17.6 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
UTFOIL/Vectorization-Public
Public-facing repository for SLAVV software
Language: MATLAB - Size: 142 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 5 - Forks: 3
YasPHP/SOFA-Robotics
A rudimentary SOFA application that uses an open-source framework to target real-time robotics simulation, with an emphasis on medical schemas.
Language: Python - Size: 61.5 KB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 5 - Forks: 0
PBLab/neural_collision_detection
Collide vasculature and neurons for fun and profit (?)
Language: C++ - Size: 36.4 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
