GitHub topics: cell-annotation
microsoft/hce-classification
Code to implement the hierarchical cross-entropy loss for single-cell annotation models
Language: Python - Size: 8.09 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 0 - Forks: 0
CahanLab/PySingleCellNet
singleCellNet in Python
Language: Jupyter Notebook - Size: 15.2 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 14 - Forks: 10
mahmoodlab/MAPS
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
Language: Jupyter Notebook - Size: 154 MB - Last synced at: 28 days ago - Pushed at: about 1 year ago - Stars: 51 - Forks: 9
xinglab-ai/genomap
Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)
Language: Python - Size: 43.7 MB - Last synced at: about 2 months ago - Pushed at: 11 months ago - Stars: 15 - Forks: 3
alperoglu/ASTRID
Tool for quick and standardized annotation of single cell transcriptomics data
Language: Python - Size: 120 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0
yonalei/sc_annotation
Consists of scripts and workflows used for single cell annotation
Language: HTML - Size: 1.54 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
jendelel/CellCounter
A small GUI application for counting cells in microscope images
Language: Python - Size: 3.91 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 5 - Forks: 0
