GitHub topics: epidemiological-models
SciCompMod/memilio
Modular spatio-temporal models for epidemic and pandemic simulations
Language: C++ - Size: 56.5 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 57 - Forks: 16
americocunhajr/D-FENSE
D-FENSE is a repository for dengue data in Brazil, enabling predictive modeling, visualization, and public health support.
Language: MATLAB - Size: 156 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 1 - Forks: 0
rajeshrinet/pyross
PyRoss: inference, forecasts, and optimised control of epidemiological models in Python. github.com/rajeshrinet/pyross
Language: Jupyter Notebook - Size: 145 MB - Last synced at: 19 days ago - Pushed at: 8 months ago - Stars: 168 - Forks: 57
jameel-institute/daedalus
[UNDER DEVELOPMENT] R package implementing the DAEDALUS model for projecting and optimising health, social, and economic costs of a pandemic.
Language: R - Size: 10.9 MB - Last synced at: 12 days ago - Pushed at: 16 days ago - Stars: 4 - Forks: 0
chrisvoncsefalvay/computational-infectious-disease
The companion repository to Computational Modeling of Infectious Disease by Chris von Csefalvay
Language: Jupyter Notebook - Size: 252 MB - Last synced at: 16 days ago - Pushed at: over 2 years ago - Stars: 11 - Forks: 7
jameel-institute/daedalus.compare
[UNDER DEVELOPMENT] Run and compare DAEDALUS scenarios of pandemic health, education, and economic costs.
Language: R - Size: 1.34 MB - Last synced at: 2 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
storopoli/Turing-Workshop 📦
DEPRECATED IN FAVOR OF TuringLang/Turing-Workshop
Language: HTML - Size: 41.9 MB - Last synced at: 28 days ago - Pushed at: over 3 years ago - Stars: 35 - Forks: 9
denissekim/Simulation-Model
A simulation model written in Python for the generation of spatial-temporal clinical data on infection outbreaks in hospitals
Language: Python - Size: 1.92 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 1 - Forks: 0
giopedro92/seird-model-exam
SEIRD model project for the Programmazione per la fisica exam.
Language: C++ - Size: 73.2 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0
ekinderdiyok/information-diffusion-on-twitter
This repository hosts my master's thesis project.
Language: Jupyter Notebook - Size: 62.6 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0
FilipeLopesPires/VideoViralizationTool
YouTube Video Viralization Tool: a mathematical tool to optimize efforts of making viral youtube videos.
Language: MATLAB - Size: 2.23 MB - Last synced at: 3 months ago - Pushed at: about 4 years ago - Stars: 2 - Forks: 0
emdemor/cov19
Modelling epidemic curve with SIRD model.
Language: Python - Size: 35 MB - Last synced at: about 1 month ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0
elynch21/Public-Health-490KR-Epidemiologic-Data-Management-and-Analysis
Undergraduate Course Work from Public Health 490KR Epidemiologic Data Management & Analysis, Taught by Professor Katherine W. Reeves, PhD, MPH
Language: Stata - Size: 7.86 MB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
JBris/sir-agent-based-modelling
Agent-based modelling of pandemics using the Susceptible, Infected, Recovered (SIR) framework.
Language: Jupyter Notebook - Size: 10.5 MB - Last synced at: 15 days ago - Pushed at: about 1 year ago - Stars: 5 - Forks: 0
jovieon/PartII_BTBproject
Code used to produce results and figures for BA Pathology project on the prospects of a BCG vaccine program in Great Britain. Developed by Joanna Vieira O'Neill, University of Cambridge.
Language: R - Size: 17.6 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
Song921012/MathEpiDeepLearningTutorial
Tutorials on math epidemiology and epidemiology informed deep learning methods
Language: Julia - Size: 57.8 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 1
TsilidisV/age-structured-SVeaiR-model
Implementation of the numerical scheme for the solution of the age-structured SVeaiR model
Language: Julia - Size: 3.47 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
pskelsey/blacklegRandomForest
A Random Forest model for predicting incidence of potato blackleg at the landscape-scale.
Language: MATLAB - Size: 33.2 KB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
JuliaEpi/MathEpiDeepLearning
Awesome-spatial-temporal-data-mining-packages. Julia and Python resources on spatial and temporal data mining. Mathematical epidemiology as an application. Most about package information. Data Sources Links and Epidemic Repos are also included. Keep updating.
Language: JavaScript - Size: 3.19 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 19 - Forks: 6
UCF-AEM/UCF-AEM
We are the AI-Epidemiology Modeling group at UCF. Our work is focused on the efficient integration of deep learning and epidemiological modeling. The website is under construction and will be ready soon.
Size: 183 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 1
MicheleDiSabato/covid-19
Forecast COVID 19 trend for three regions in Italy.
Language: Jupyter Notebook - Size: 51.4 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 1
ichalkiad/covid19modelrisk
This repository contains the code for the paper "Infection Rate Models for COVID-19: Model Risk and Public Health News Sentiment Exposure Adjustments", by Ioannis Chalkiadakis, Kevin Hongxuan Yan, Gareth W. Peters, Pavel V. Shevchenko.
Language: R - Size: 50.7 MB - Last synced at: 21 days ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0
MicheleDiSabato/NN_LearningOfRstar_COVID19
Machine learning algorithms for the calibration of epidemiological compartmental models: application to the Italian COVID-19 outbreaks in Italy and to the newly developed SUIHTER model.
Language: MATLAB - Size: 3.12 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0
akapet00/covid-19-modelling-croatia
Code for the paper "Modelling the SARS-CoV-2 epidemic in Croatia: a comparison of three analytic approaches"
Language: Jupyter Notebook - Size: 55 MB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
BlankTiger/SEIRD_model
Educational tool used to visualize and solve the SEIRD epidemiological model with vaccination functionality. Allows the user to save results, parameters and more.
Language: Python - Size: 877 KB - Last synced at: 4 days ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
GeoRouv/covid19-model
📈 Examination of the impact of COVID-19 spread by using a custom epidemiological model.
Language: Component Pascal - Size: 1.01 MB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 0
sigeek/fitting-covid-19
Final project for the course "Modelli Matematici per la Biomedicina" at Politecnico di Torino, academic year 2020/2021
Language: Jupyter Notebook - Size: 33 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
epispot/manual
The official manual to the epispot package
Size: 393 KB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
wtennant/arbo_gpu_fit
Fitting a stochastic individual based model for arboviral disease.
Language: C++ - Size: 94.7 KB - Last synced at: 9 months ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
StochSS/Covid19_Modeling
Epidemiological modeling in StochSS
Language: Jupyter Notebook - Size: 2.93 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 2
