mishra-lab/hiv-model-eswatini

HIV mdelling project on intersections of risk (FSW) & intervention (ART) heterogeneity based on Eswatini

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je-suis-tm/graph-theory

Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Randomized Distributed, Vizing, Topological Sort, DFS, BFS

Language: Jupyter Notebook - Size: 38.7 MB - Last synced at: 17 days ago - Pushed at: almost 3 years ago - Stars: 369 - Forks: 91

JBris/beast2-experiments

Experiments with the BEAST 2 software

Language: Python - Size: 34.9 MB - Last synced at: 23 days ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

JBris/beast2-docker

Docker and Apptainer setup for the BEAST 2 software

Language: R - Size: 679 KB - Last synced at: 23 days ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

pitkajuh/libreMCM

libreMCM (libre Multi Compartment Modelling) is a free software for carrying out deterministic and probabilistic modelling.

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KrishnamurthyLab/spatialEpisim.foundation Fork of bryce-carson/spatialEpisim.foundation

Foundational functions and algorithms for the spatialEpisim Shiny ✨ R application.

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bryce-carson/ehpi

A Basic Compartmental Epidemic Modelling API

Language: R - Size: 620 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

aledega/perceived-severity-behaviors

Code for the paper: Modeling the interplay between disease spread, behaviors, and disease perception with a data-driven approach

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DND-DRDC-RDDC/OS_PyCoMod

PyCoMod is a Python package for building and running compartment models derived from systems of differential equations such as the Susceptible-Infectious-Recovered (SIR) model of infectious diseases.

Language: Python - Size: 261 KB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 3 - Forks: 3

Gilbert-Sobremisana/https-doi.org-10.1016-j.jtice.2023.105076

Exploring characteristics of value-added production of anthraquinones in rhubarb via fermentation: Compartmental modelling and molecular docking analysis

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jdepreter/com-mod-covid-19

Language: Python - Size: 39.1 MB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

QuanticPony/compartmental

Vectored GPU based compartmental simulations. Easy to use. With some ABC (Approximate Bayesian Computation) utils

Language: Python - Size: 2.33 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

kentoabeywardane/COVID19-In-Host-Viral-Load-Modeling

COVID-19: Modeling In-Host Viral and Innate Immune System Dynamics

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nishi1612/Modelling-and-Simulation

CS302 Modelling and Simulation Weekly Assignments in python based on modelling different systems - SARS, Malaria, SIR

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marquescruz/covid19-contact-tracing-cases-simulation

Simulation of COVID-19 cases arising from high-risk contacts

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ElsevierSoftwareX/SOFTX-D-22-00005 Fork of ama-yash/SimulatorX

Data driven simulations of infectious diseases: Exploring facial recognition approach in predicting the infection severity

Size: 7.03 MB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

GeoRouv/covid19-model

📈 Examination of the impact of COVID-19 spread by using a custom epidemiological model.

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mishra-lab/sr-heterogeneity-hiv-models

scoping review of heterogeneity and mixing in dynamical models of HIV transmission [JK PhD]

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mishra-lab/turnover

turnover in epidemic models: a unified framework and exploring the influence on model outputs

Language: Python - Size: 31.2 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

innovative-simulator/NetworksAndUniMix

Compare disease transmission in a social network with universal mixing

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