GitHub topics: computational-epidemiology
ngozzi/covid-behavior-models
Python implementation of behavioral-epidemic models for COVID-19
Language: Jupyter Notebook - Size: 1.42 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 1 - Forks: 0
ahgroup/billings-high-dose-heterologous-public 📦
Code and data associated with Billings et al., "High dose inactivated influenza vaccine inconsistently improves heterologous antibody responses in an elderly human cohort", JID 2025.
Language: TeX - Size: 2.37 GB - Last synced at: 8 days ago - Pushed at: 9 days ago - Stars: 0 - Forks: 0
epistorm/epydemix
epydemix, the ABC of epidemics
Language: Jupyter Notebook - Size: 20.2 MB - Last synced at: 10 days ago - Pushed at: 17 days ago - Stars: 33 - Forks: 4
americocunhajr/CE-ABC
CE-ABC is a code to simulate the epidemic outbreaks with mechanistic models through a cross-entropy approximate Bayesian framework.
Language: MATLAB - Size: 68.1 MB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 7 - Forks: 1
americocunhajr/epidWaves
epidWaves is a Matlab/Python package to fit multi-wave statistical models to the complex epidemic data.
Language: MATLAB - Size: 9.82 MB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 2
chrisvoncsefalvay/computational-infectious-disease
The companion repository to Computational Modeling of Infectious Disease by Chris von Csefalvay
Language: Jupyter Notebook - Size: 252 MB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 11 - Forks: 7
pitmonticone/EpiSimulator
EpiSimulator: A Data-Driven Stochastic Hybrid Model for COVID-19 in Italy.
Language: Jupyter Notebook - Size: 513 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 7 - Forks: 1
ngozzi/epydemix
epydemix, the ABC of epidemics
Language: Jupyter Notebook - Size: 211 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 2 - Forks: 0
wzbillings/dissertation-proposal 📦
Code, text, figures, etc. for reproducing my dissertation proposal, "Impact of Host and Vaccine Characteristics on Immune Responses following Influenza Vaccination".
Language: TeX - Size: 138 MB - Last synced at: 8 days ago - Pushed at: 9 months ago - Stars: 2 - Forks: 0
aledega/perceived-severity-behaviors
Code for the paper: Modeling the interplay between disease spread, behaviors, and disease perception with a data-driven approach
Language: Jupyter Notebook - Size: 26.7 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0
DQ4781/LF-ShapAnalysis
An Analysis of Lassa Fever Outbreaks in Nigeria using Machine Learning Models and Shapley Values
Language: Jupyter Notebook - Size: 20.4 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0
sanguedemonstro/reproduction-number-covid19-santa-catarina
O Ăndice de contágio do COVID-19 regionalizado, por estados, municĂpios e atĂ© bairros, em tempo real, pode apoiar a tomada de decisões do poder pĂşblico sobre como conter o contágio e como conduzir a retomada da atividade econĂ´mica de forma segura.
Language: Jupyter Notebook - Size: 4.42 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
DQ4781/Monkeypox-Dashboard
A Real-Time, Data-Driven Infectious Disease Dashboard and Surveillance Application to Monitor the 2022-2023 Global Mpox Outbreak
Language: Python - Size: 5.68 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
DQ4781/Lassa-ABM
An Agent-Based Model used to Simulate Rodent Control Strategies for the Control of Periodic Outbreaks of Lassa Fever in Nigeria
Language: Python - Size: 20.4 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
InPhyT/inphyt.github.io
Special repository hosting the InPhyT website.
Language: HTML - Size: 185 MB - Last synced at: 8 days ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 1
JuliaEpi/.github
Special repository containing the profile directory of JuliaEpi.
Size: 43.9 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0
nowinseason/Kor_HFMD
HFMD simulation
Language: R - Size: 52.7 KB - Last synced at: almost 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
ngozzi/vaccine-behaviour
Code for the paper: The importance of non-pharmaceutical interventions during the COVID-19 vaccine rollout
Language: Jupyter Notebook - Size: 188 MB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 3 - Forks: 0
Kerr93/DARt
A tool to estimate Instantaneous Reproduction Number
Language: HTML - Size: 2.81 MB - Last synced at: 6 days ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 0
