GitHub topics: phylogenetic-data
lczech/genesis
A library for working with phylogenetic and population genetic data.
Language: C++ - Size: 14.6 MB - Last synced at: 11 days ago - Pushed at: 13 days ago - Stars: 61 - Forks: 12
lczech/gappa
A toolkit for analyzing and visualizing phylogenetic placement data
Language: C++ - Size: 11.3 MB - Last synced at: 12 days ago - Pushed at: 2 months ago - Stars: 60 - Forks: 7
kingaa/ouch
Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses
Language: R - Size: 1.52 MB - Last synced at: 15 days ago - Pushed at: 6 months ago - Stars: 16 - Forks: 4
VoSeq/VoSeq
:evergreen_tree: VoSeq is a database to store voucher and sequence data
Language: Python - Size: 45.3 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
sophiagosselin/tANI_tool
Script for creating a tANI distance matrix for use in phylogenetic reconstruction.
Language: Perl - Size: 142 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 2
hansiu/MatPhylobi
a tool for automatic construction of molecular data matrix for phylogenetic inference based on GenBank records
Language: Python - Size: 789 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 4 - Forks: 0
bioinfweb/JPhyloIO
A Java library for event-based reading and writing of different phylogenetic file formats through a common interface
Language: Java - Size: 8.06 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0
AKU-CITRIC-Center-for-Bioinformatics/ncov
Genomic Epidemiology of SARS-CoV-2 in Pakistan
Size: 57.2 MB - Last synced at: 5 months ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 0
btmartin721/raxml_ascbias
Script for removing or counting invariant sites for the RAxML ascertainment bias corrections
Language: Python - Size: 25.4 KB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 11 - Forks: 1
eascarrunz/sokalize
Transform multistate characters to binary characters in NEXUS character matrices
Language: Python - Size: 106 KB - Last synced at: almost 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
carrineblank/MicroPIEDigester
Converts raw phenotypic character information generated by MicroPIE into a coded character matrix (nexus file).
Language: Perl - Size: 1.23 MB - Last synced at: about 2 years ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0
