GitHub topics: genomic
Vincent-Therrien/stelaro
Metagenomic toolbox / Outils de métagénomique
Language: Jupyter Notebook - Size: 383 KB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 0 - Forks: 0
kyegomez/Prometheus
Welcome to Prometheus, the revolutionary AI model that allows you to generate DNA sequences for any creature you can imagine. Whether it’s a pink panda, an elephant-sized turtle, or a completely new lifeform from your wildest dreams, Prometheus decodes the mystery of biology and synthesizes genetic blueprints with precision.
Language: Python - Size: 2.17 MB - Last synced at: 16 days ago - Pushed at: 18 days ago - Stars: 8 - Forks: 0
dellytools/delly
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
Language: C++ - Size: 37.7 MB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 462 - Forks: 138
Cmint9/RareLink-Harvard-
RareLink is the Grand Champion🥇 for Genomic Diagnostics track at Harvard Rare Disease 2025.
Size: 5.26 MB - Last synced at: 30 days ago - Pushed at: 30 days ago - Stars: 0 - Forks: 0
dputhier/pygtftk
A python package and a set of shell commands to handle GTF files
Language: Python - Size: 143 MB - Last synced at: 29 days ago - Pushed at: 11 months ago - Stars: 48 - Forks: 7
bcgsc/pori_graphkb_client
Front-end web client for the GraphKB project
Language: TypeScript - Size: 28 MB - Last synced at: 16 days ago - Pushed at: 3 months ago - Stars: 9 - Forks: 1
smthorat/Python_Bioinformatics
This repository serves as a hub for various bioinformatics projects developed using Python. It includes Gene-Assembly, Gene-Classifier, BioResearchChat
Language: Jupyter Notebook - Size: 7.73 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
cumbof/TCGA2BED 📦
The Cancer Genome Atlas Data Extraction and Conversion Tool
Language: Java - Size: 14.9 MB - Last synced at: 2 months ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 2
CSB5/driver_evaluation
Language: Perl - Size: 1.18 MB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 4 - Forks: 1
cobilab/geco2
An improved compression tool for DNA sequences
Language: C - Size: 307 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 8 - Forks: 2
AngelCampos/m.shortcuts
R package with sourced, original, and wrappers to functions I like and find recurrently useful.
Language: R - Size: 76.2 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
jtwrt/VARIANT_VISUALIZER
Language: Jupyter Notebook - Size: 16.7 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
ding-lab/hotspot3d
3D hotspot mutation proximity analysis tool
Language: Perl - Size: 1.11 GB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 44 - Forks: 26
italo-granato/BGGE
Package to genomic prediction focused on GE genomic models
Language: R - Size: 835 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 3
FJBiocode/ShortSequenceRastreator
Short Sequence Rastreator allows genetic diversity analysis and preparation of input files for other softwares such as STRUCTURE, DARwin and SPAGeDi.
Language: Python - Size: 25.4 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
jakyzhu/MACAU2
An R package designed for generalized linear mixed model inference in genomic sequencing studies
Language: R - Size: 665 KB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 0
MikeACG/sequenceDistance
Fast "GenomicRanges" style distance calculation
Language: C++ - Size: 58.6 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
yumatchlab/solidity-stringutils Fork of sensecollective/solidity-stringutils
Basic string utilities for Solidity
Size: 18.6 KB - Last synced at: over 1 year ago - Pushed at: over 8 years ago - Stars: 0 - Forks: 0
TheJacksonLaboratory/JAX-CNV
Official code repository for JAX-CNV
Language: C++ - Size: 2.52 MB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 10 - Forks: 2
mtsz-thiago/AnGRA
Biblioteca para análise de genômica de resistência a antibióiticos.
Language: Dockerfile - Size: 825 KB - Last synced at: almost 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
HighlanderLab/nlubanga_tea_breeding_gs
Simulation of tea breeding programmes using genomic selection
Language: R - Size: 5.45 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 1
romain-villa/diff-motif_project
Enrichment analysis of motifs with ancient and recent CNEs
Language: R - Size: 250 KB - Last synced at: 3 months ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 1
mutalyzer/crossmapper
HGVS numbering conversions
Language: Python - Size: 199 KB - Last synced at: 5 days ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0
caravagn/evoverse.datasets
Datasets and analysis results released with the REVOLVER package for Cancer Evolution.
Language: R - Size: 4.15 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 4 - Forks: 0
tushardave26/SimVar
Simulate Variants for provided genomic coordinates
Language: Python - Size: 14.6 KB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
