Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: cancer-research

sourceduty/COVID-19

🧬 The COVID-19 pandemic, high-performance computing and cancer research.

Size: 10.7 KB - Last synced: about 3 hours ago - Pushed: about 5 hours ago - Stars: 0 - Forks: 0

sourceduty/Cancer

🧬 Cancer research, simulations and science.

Size: 104 KB - Last synced: about 4 hours ago - Pushed: about 5 hours ago - Stars: 0 - Forks: 0

Hansi-Thewarapperuma/Inherited_Risk_Detector

Identification of cancer-causing variants

Language: Python - Size: 7.74 MB - Last synced: about 4 hours ago - Pushed: 28 days ago - Stars: 1 - Forks: 0

ncihtan/htan-portal

The HTAN Data Portal

Language: TypeScript - Size: 184 MB - Last synced: about 2 hours ago - Pushed: about 3 hours ago - Stars: 9 - Forks: 10

yintz/SPACEmapX

SPACEmapX

Language: R - Size: 213 KB - Last synced: about 16 hours ago - Pushed: 1 day ago - Stars: 1 - Forks: 0

Chaste/Chaste

Chaste - Cancer Heart And Soft Tissue Environment - main public repository.

Language: C++ - Size: 319 MB - Last synced: 2 days ago - Pushed: 2 days ago - Stars: 115 - Forks: 55

udiram/Glioblastoma_analysis

Detecting various characteristics of glioblastoma using Deep Learning

Language: Python - Size: 1.47 GB - Last synced: 3 days ago - Pushed: 7 days ago - Stars: 2 - Forks: 2

haranrk/DigiPathAI

Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay

Language: JavaScript - Size: 138 MB - Last synced: 3 days ago - Pushed: 7 months ago - Stars: 62 - Forks: 25

ShixiangWang/sigminer

🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

Language: R - Size: 51 MB - Last synced: about 1 month ago - Pushed: 2 months ago - Stars: 134 - Forks: 18

HUBioDataLab/DeepResponse Fork of burakcan-izmirli/DeepResponse

DeepResponse: Large Scale Prediction of Cancer Cell Line Drug Response with Deep Learning Based Pharmacogenomic Modelling

Language: Python - Size: 294 KB - Last synced: 9 days ago - Pushed: 4 months ago - Stars: 0 - Forks: 2

sigven/phenOncoX

Crossmapped phenotype ontologies for the oncology domain

Language: R - Size: 553 MB - Last synced: 10 days ago - Pushed: 10 days ago - Stars: 9 - Forks: 0

mahmoodlab/TOAD

AI-based pathology predicts origins for cancers of unknown primary - Nature

Language: Python - Size: 2.79 MB - Last synced: 8 days ago - Pushed: over 2 years ago - Stars: 167 - Forks: 44

ScholCommLab/cancer-news

Language: Jupyter Notebook - Size: 15.5 MB - Last synced: 12 days ago - Pushed: 12 days ago - Stars: 0 - Forks: 0

kevinhu/mdm4-splicing

Computational analysis of RPL22 alterations and impact on MDM4 splicing

Language: Jupyter Notebook - Size: 938 MB - Last synced: 13 days ago - Pushed: 13 days ago - Stars: 0 - Forks: 0

gcjordi/skinlesionanalyzer_webapp_jgc

WebApp para analizador de lesiones de piel mediante ML

Language: CSS - Size: 12.2 MB - Last synced: 15 days ago - Pushed: about 2 years ago - Stars: 1 - Forks: 1

avivace/cervical-cancer

Exploratory study on Cervical Cancer: verifying known causal relations and assessing risk factors from women medical history datasets.

Language: TeX - Size: 1.26 MB - Last synced: 15 days ago - Pushed: over 3 years ago - Stars: 2 - Forks: 0

Alberto-00/Detection-signature-cancer

The Cancer Genome Atlas (TCGA), a cancer genomics reference program, has molecularly characterized more than 20,000 primary cancer samples and paired normal samples covering 33 types of cancer. This joint effort between the NCI and the National Human Genome Research Institute began in 2006.

Language: Python - Size: 162 MB - Last synced: 18 days ago - Pushed: about 2 months ago - Stars: 0 - Forks: 1

fabio-alfieri/mutation_compensation

Language: R - Size: 1.6 MB - Last synced: 20 days ago - Pushed: 20 days ago - Stars: 2 - Forks: 2

mhmcc/calcium-PIEZO1

Quantitative analysis of calcium influx via PIEZO1 in breast cancer cells for varying cell morphology

Language: Jupyter Notebook - Size: 1.56 MB - Last synced: 21 days ago - Pushed: 21 days ago - Stars: 0 - Forks: 0

sigven/geneOncoX

Human gene annotations for the oncology domain

Language: R - Size: 40.6 MB - Last synced: 22 days ago - Pushed: 22 days ago - Stars: 6 - Forks: 0

victor-iyi/cancer-research

A breast cancer research project

Language: CSS - Size: 6.31 MB - Last synced: 23 days ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0

bbennett80/pedigree

A simple web app for constructing pedigrees for genetic cancer risk assessment.

Language: JavaScript - Size: 238 KB - Last synced: 24 days ago - Pushed: 24 days ago - Stars: 0 - Forks: 0

KarlJack47/HybridCAFieldCancerization

Hybrid Cellular Automata that represents field cancerization.

Language: C - Size: 7.5 MB - Last synced: 29 days ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

ZarnackGroup/Elwakeel-et-al-2021

Supplementary R scripts for the manuscript "Disrupting PGE2/EP3 signaling in cancer-associated fibroblasts limits mammary carcinoma growth but promotes metastasis"

Language: R - Size: 618 KB - Last synced: about 1 month ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

akram-mohammed/akram-mohammed.github.io

My personal website :sparkles:

Language: HTML - Size: 8.16 MB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 0

zafarali/tumorheterogeneity

A more powerful analysis of tumor heterogeneity

Language: Jupyter Notebook - Size: 4.88 MB - Last synced: about 1 month ago - Pushed: about 6 years ago - Stars: 0 - Forks: 1

GilbertLabUCSF/CanDI

CanDI - A global cancer data integrator

Language: Jupyter Notebook - Size: 3.23 MB - Last synced: 29 days ago - Pushed: 29 days ago - Stars: 6 - Forks: 5

CODAIT/deep-histopath

A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge

Language: Jupyter Notebook - Size: 49.5 MB - Last synced: 15 days ago - Pushed: about 5 years ago - Stars: 199 - Forks: 86

hw538/cfDNAPro

cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis

Language: R - Size: 2.67 MB - Last synced: 28 days ago - Pushed: 28 days ago - Stars: 22 - Forks: 2

wizrads/AVATAR

Audio-Visual Assisted Therapeutic Ambience in Radiotherapy (AVATAR)

Size: 65.3 MB - Last synced: about 1 month ago - Pushed: about 2 months ago - Stars: 1 - Forks: 0

ICBI/gdoc

G-DOC Web Application

Language: Groovy - Size: 989 MB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 4 - Forks: 1

ShriRachana/Data-Science-Project---Cancer-Data-Analysis-

This project is my first step into the world of Data Science, thanks to my professor Dr.Helen and my teammates for helping me do this project. The project deals with the analysis of cancer data from www.cancer.org for the years 2011-2014.

Size: 145 KB - Last synced: about 2 months ago - Pushed: over 9 years ago - Stars: 0 - Forks: 0

Neal-Liu1/Multi-omics-integration

Contains code related to my multi-omics integration project at WEHI.

Language: R - Size: 136 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 1 - Forks: 0

TomKellyGenetics/thesis

Thesis prepared in LaTeX for submission to the University of Otago (in Genetics)

Language: TeX - Size: 632 MB - Last synced: about 2 months ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

manjunath-satyamurthy/decision-trees-cancer-prediction-

An example of predicting breast cancer using existing data to learn with decision trees (scikit-learn/python)

Language: Python - Size: 4.88 KB - Last synced: 2 months ago - Pushed: about 7 years ago - Stars: 5 - Forks: 3

sps41/Dr-Stephen-Smith-CV

Size: 2.09 MB - Last synced: 2 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

phillipnicol/SITH

An R package for visualizing and analyzing a spatial model of intratumor heterogeneity

Language: C++ - Size: 21.7 MB - Last synced: 12 days ago - Pushed: about 1 month ago - Stars: 8 - Forks: 0

antoniatsv/HTL0039732-Dose-Escalation-Trial

Two-parameter Bayesian logistic dose-escalation model to find the maximum tolerated dose (MTD) of HTL0039732 agent alone and in combination with a backbone agent in patients with solid tumours.

Language: R - Size: 99.6 KB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 0

huangwb8/GSClassifier

A comprehensive classification tool based on pure transcriptomics for precision medicine

Language: R - Size: 32.2 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 1 - Forks: 1

antosalerno/TEPA_code

Analysing single-cell and DSP data to test the effect of copper chelation with TEPA in Neuroblastoma mice

Language: R - Size: 648 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0

burakcan-izmirli/DeepResponse

DeepResponse: Large Scale Prediction of Cancer Cell Line Drug Response with Deep Learning Based Pharmacogenomic Modelling

Language: Python - Size: 330 KB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 3 - Forks: 3

bhklab/consensusOV

Implements four major subtype classifiers for high-grade serous (HGS) ovarian cancer.

Language: R - Size: 47.3 MB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 2 - Forks: 0

MIMBCD-UI/meta

:paperclip: About MIMBCD-UI Project

Size: 1.03 GB - Last synced: about 1 month ago - Pushed: about 1 year ago - Stars: 12 - Forks: 4

mida-project/meta Fork of MIMBCD-UI/meta

:paperclip: About MIDA Project

Size: 143 MB - Last synced: 27 days ago - Pushed: over 3 years ago - Stars: 12 - Forks: 1

Anukuga/Anukuga Fork of 23W-GBAC/Anukuga

the Origins of Cancer: Tracing the Unknown" Cancer originates from the uncontrolled growth and division of abnormal cells. Normal cells in the body grow, divide, and die in a regulated manner. However, when genetic mutations or alterations occur, these cells can evade normal growth controls, leading to the formation of a tumor.

Language: HTML - Size: 214 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0

Anivader/HoloScreen-onco

High-throughput detection and enumeration of tumor cells in blood using Digital Holographic Microscopy (DHM) and Deep Learning.

Language: MATLAB - Size: 75.2 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0

EdRey05/Resources_for_Mulligan_Lab

Notebooks and scripts made by Eduardo Reyes Alvarez (Ph.D.) to aid in the data processing and quantification of projects on Dr. Lois Mulligan's Lab (Queen's University). For better visualization of the content see:

Language: Jupyter Notebook - Size: 67.1 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0

justinliu23/lung-cancer-diagnosis

Classifies a histopathological examination of lung tissue

Language: Jupyter Notebook - Size: 816 MB - Last synced: 5 months ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

leorrose/SLGC-tissue-similarity-and-grading

Nondestructive Spatial Lipidomics for Glioma Classification - Tissue Similarity and Grading

Language: Python - Size: 127 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 1 - Forks: 0

BoevaLab/CanSig

Discovering de novo shared transcriptional programs in single cancer cells

Language: Python - Size: 5.15 MB - Last synced: 5 days ago - Pushed: 10 months ago - Stars: 12 - Forks: 3

kevinhu/cancer_data

A unified downloader+preprocessor for cancer genomics datasets

Language: Python - Size: 669 KB - Last synced: 9 days ago - Pushed: about 1 month ago - Stars: 14 - Forks: 6

LUCASDNORONHA/Cancer_and_COVID19-SaoPaulo_Metropolitan_area

Análise do Impacto da COVID-19 nos Cânceres de Pulmão (CID-10 C34) e de Sangue (CID-10 C91 e C92) nas Principais Cidades de São Paulo

Language: Jupyter Notebook - Size: 1.17 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

nusnlp/cancer-response-inference

Repository for Cancer Disease Response Inference

Language: Python - Size: 204 KB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 1 - Forks: 2

noeyislearning/cancer-linear-regression-model

The correlation between socioeconomic status and lung cancer incidence and mortality rates among low-income populations in the United States.

Size: 186 KB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 1 - Forks: 0

Masood-Lab/masood-lab.github.io

Public website of Masood Lab

Language: SCSS - Size: 5.15 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 0 - Forks: 0

lauramann/cervicalCancerAnalysis

Exploration of the risks of cervical cancer dataset, using supervised & unsupervised machine learning techniques to predict cervical cancer cases resulting in biopsies.

Language: Jupyter Notebook - Size: 559 KB - Last synced: 7 months ago - Pushed: about 6 years ago - Stars: 2 - Forks: 7

robi56/Survival-Analysis-using-Deep-Learning

This repository contains morden baysian statistics and deep learning based research articles , software for survival analysis

Size: 13.7 KB - Last synced: 7 months ago - Pushed: 9 months ago - Stars: 199 - Forks: 69

TheFloatingString/Cure-Melanoma

Using Deep Learning to enhance cancer treatment. Project presented at the 2018 Startupfest hackathon.

Language: Python - Size: 25.1 MB - Last synced: 7 months ago - Pushed: almost 6 years ago - Stars: 5 - Forks: 2

mribeirodantas/vidente

R package to parse and preprocess the Surveillance, Epidemiology, and End Results (SEER) Program data from NIH/NCI

Language: R - Size: 143 KB - Last synced: 7 months ago - Pushed: about 5 years ago - Stars: 5 - Forks: 1

MathCancer/PhysiCell

PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!

Language: C++ - Size: 966 MB - Last synced: 7 months ago - Pushed: 8 months ago - Stars: 110 - Forks: 77

lidox/nccn-distress-thermometer

Android App: The German version of the NCCN Distress-Thermometer Empirical examination of a screening instrument for the detection of psychosocial load for cancer patients

Language: Java - Size: 10.3 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 2

franciscozorrilla/Chalmers-iGEM2018

COM-dFBA is a MATLAB based COMmunity Dynamic Flux Balance Analysis framework developed by the Chalmers iGEM 2018 team. For this work, we were nominated for best modeling at the Giant Jamboree.

Language: HTML - Size: 327 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0

cdiener/proliferation

Project to study proliferation and metabolic liabilities across several thousand cancer samples.

Language: R - Size: 29.2 MB - Last synced: 7 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 3

JZK00/BM-GBM

Some accessible radiomics datas were provided in this link.

Language: Python - Size: 44.6 MB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 11 - Forks: 1

nrohani/MolecularSubtypes

Classifying Breast Cancer Molecular Subtypes

Language: Python - Size: 17.7 MB - Last synced: 7 months ago - Pushed: about 3 years ago - Stars: 6 - Forks: 5

ThierryMondeel/HCC_flux_balance_analysis

Simultaneous Integration of Gene Expression and Nutrient Availability for Studying the Metabolism of Hepatocellular Carcinoma Cell Lines | Ewelina Węglarz-Tomczak, Thierry D.G.A. Mondeel, Diewertje G.E. Piebes, Hans V. Westerhoff | Biomolecules 2021

Language: Jupyter Notebook - Size: 24.1 MB - Last synced: 7 months ago - Pushed: about 2 years ago - Stars: 2 - Forks: 1

Ashford-A/PRECEPTS1

This repository houses a workflow that uses biological feature trees to segregate cancer RNA-seq datasets, then it trains machine learning models to predict the presence or absence of known, cancer-associated DNA-level mutations.

Language: Python - Size: 70.5 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 0 - Forks: 0

MohamedOmar2020/Elastic-Net-Regression

Creating a classifier for bladder cancer using Elastic Net Regression

Language: R - Size: 1.13 MB - Last synced: 8 months ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

MohamedOmar2020/Keras_TensorFlow

Using Keras to build a deep neural network for bladder cancer progression

Language: R - Size: 757 KB - Last synced: 8 months ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

MohamedOmar2020/Random-Forest

Creating a Random Forest model to predict the progression of bladder cancer

Language: R - Size: 76.2 KB - Last synced: 8 months ago - Pushed: almost 5 years ago - Stars: 2 - Forks: 1

MohamedOmar2020/13-machine-learning-models

Six machine learning models for predicting bladder cancer progression using Caret package

Language: R - Size: 2.39 MB - Last synced: 8 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 1

sigven/cpsr

Cancer Predisposition Sequencing Reporter (CPSR)

Language: R - Size: 18.8 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 52 - Forks: 12

RaqManzano/R-tutorials

R tutorials for basic analyses in R for cancer samples.

Size: 6.72 MB - Last synced: 8 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0

sachsURAP/LSSR-2019

Data and code for the Life Sciences in Space Research 2019 paper. Concerns modeling murine Harderian gland tumorigenesis induced by mixed radiation fields.

Language: R - Size: 4.75 MB - Last synced: 9 months ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 1

SirArnoldB/Cancer-Insights-Hub

Cancer Insights Hub provides a comprehensive resource for cancer information and research updates, designed for researchers, students, healthcare professionals, and the general public.

Language: JavaScript - Size: 101 MB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 1 - Forks: 0

Syksy/curatedPCaData

Curated Prostate Cancer Data R-package

Language: R - Size: 4.53 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 7 - Forks: 4

DeannaCarina/BCAwareness

Hackathon Project in partnership with ITLabs. Deadline Monday 15th November 2022 @ 3pm.

Language: HTML - Size: 65.7 MB - Last synced: 9 months ago - Pushed: over 2 years ago - Stars: 1 - Forks: 1

cohenoa/Computational-quantification-of-cellular-subpopulations-within-tumors-in-anti-cancer-therapy

Code to accompany the paper: "Computational quantification and characterization of independently evolving cellular subpopulations within tumors is critical to inhibit anti-cancer therapy resistance"

Language: MATLAB - Size: 4.88 KB - Last synced: 9 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

rosaak/germline_caya_solidtumor_analysis

CAYA Analysis

Language: Jupyter Notebook - Size: 24.2 MB - Last synced: 9 months ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 1

albinsjolin/cancer-whitepaper

Cancer Whitepaper

Size: 948 KB - Last synced: 15 days ago - Pushed: about 1 year ago - Stars: 48 - Forks: 3

mirandavdende/vibrogym-study

Language: R - Size: 11.7 KB - Last synced: 10 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

Vikasdubey0551/ML-drug-effectiveness-abl-kinase

Classification of bioactivity and effectiveness of the drug based on Lipinski molecular descriptors for ABL-kinase using Machine learning classfiers

Language: Jupyter Notebook - Size: 6.04 MB - Last synced: 10 months ago - Pushed: almost 4 years ago - Stars: 5 - Forks: 1

michalbukowski/aml-analysis

A collection of Jupyter notebooks for basic analysis of the data from the "BeatAML" study by Tyner et al. (2018)

Language: Jupyter Notebook - Size: 41.2 MB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 0 - Forks: 0

KseniiaCheloshkina/cancer_breakpoints_hotspots_prediction_wide

Cancer breakpoints hotspots prediction

Language: R - Size: 604 MB - Last synced: 10 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

mauliknariya/mauliknariya.github.io Fork of academicpages/academicpages.github.io

Postdoctoral Fellow at Harvard Medical School

Language: JavaScript - Size: 91 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

morinlab/GAMBLR

Set of standardized functions to operate with genomic data

Language: R - Size: 65.6 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 3 - Forks: 2

FunGeST/Palimpsest

An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.

Language: R - Size: 58.2 MB - Last synced: 7 months ago - Pushed: almost 3 years ago - Stars: 67 - Forks: 19

Gurvinder-Singh02/Cancer_compass

Repository Name: Cancer Compass Description: This repository contains the source code and project files for cancer compass, a comprehensive mobile application designed to support cancer patients and their families. The app provides features such as symptom tracking, educational resources, and a chatting featured to for community support

Language: TypeScript - Size: 19.4 MB - Last synced: 11 months ago - Pushed: 11 months ago - Stars: 0 - Forks: 0

c-rutter/crcrdm

Robust Decision Making Tools for Cancer Screening Models

Language: R - Size: 9.57 MB - Last synced: 10 months ago - Pushed: 11 months ago - Stars: 3 - Forks: 0

francescopatane96/Computer_aided_drug_discovery_kit

This pipeline provides a way to perform pharmaceutical compounds virtual screening using similarity-based analysis, ligand-based and structure-based techniques. The pipeline contains a collections of modules to perform a variety of analysis.

Language: Jupyter Notebook - Size: 4.43 MB - Last synced: 9 months ago - Pushed: 9 months ago - Stars: 4 - Forks: 2

AndromathArcanitus/Cancer-Model-Solving

The code used to solve a Bio-Mechanical system of PDEs built for cancer modeling

Language: Python - Size: 66.4 KB - Last synced: 12 months ago - Pushed: 12 months ago - Stars: 0 - Forks: 0

koushikkumarl/capsuleNetwork_cancerclassification

Image classification on lung and colon cancer histopathological images through Capsule Networks or CapsNets.

Language: Jupyter Notebook - Size: 171 KB - Last synced: 7 months ago - Pushed: over 3 years ago - Stars: 8 - Forks: 5

ishamada/CRC

Language: R - Size: 131 KB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

bbglab/cancer-detective

A simulation to learn about cancer and mutations, based on Cancer Genome Interpreter

Language: Jupyter Notebook - Size: 38.9 MB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 1 - Forks: 0

marl2en/cancer

Analysis by gender, age group, cancer type and prediction

Language: Python - Size: 26.6 MB - Last synced: 11 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

mrzResearchArena/Anticancer-Peptides-CNN

Anticancer Peptide Identification employing Multi-headed Deep-CNN

Language: Jupyter Notebook - Size: 11.3 MB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 9 - Forks: 4

Valderas7/BreastCarcinomaProject

Repositorio para el proyecto con código PI-0032-2017, cuyo objetivo es la predicción de metástasis a distancia, de supervivencia, de recidivas y de mutaciones de genes que se producen con el carcinoma de mama mediante el uso de datos clínicos, inmunohistoquímicos e imágenes de diagnóstico.

Language: Python - Size: 1.18 GB - Last synced: 12 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

hasansust32/Prostate_Cancer_Predictio

His study addresses these concerns by predicting prostate cancer using six (6) machine learningtechniques: Random Forest, SVM, KNN, Logistic Regression, Neutral Network, and the Ensemble model. We gathered data from 100 patients who were placed in ten different circumstances. The data was categorised as malignant or non-cancerous. Among the six machine learning techniques, logistic regression, neuralnetworks, and ensemble learning have the potential to reach an accuracy of 95.00 percent. Ensemble learning can detect 96.55%of true positive prostate cancer in our model. KNN has a 90%accuracy rate, whereas SVM and Random Forest have an 85%accuracy rate.

Language: Jupyter Notebook - Size: 1.99 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 1 - Forks: 0

rhisehl/Cancer-Research-Report

Creation of tables and figures for a hypothetical cancer research project using Python (Matplotlib, Pandas, Scipy)

Language: Jupyter Notebook - Size: 339 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

ninadakolekar/KRAS-Mutation-Detection 📦

Mutation Detection in Lung Cancer Cell Lines using CNNs

Language: Python - Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

Related Keywords
cancer-research 142 cancer-genomics 31 machine-learning 29 cancer 27 deep-learning 18 bioinformatics 18 python 15 computational-biology 14 r 12 genomics 11 cancer-detection 11 data-science 10 cancer-data 9 keras 6 breast-cancer 6 tensorflow 6 machine-learning-algorithms 5 r-package 5 tcga 5 cancer-imaging-research 5 healthcare 5 python3 5 convolutional-neural-networks 5 survival-analysis 4 data-analysis 4 ai 4 health 4 systems-biology 4 artificial-intelligence 4 visualization 3 oncology 3 classification 3 rna-seq-analysis 3 science 3 jupyter-notebook 3 data-visualization 3 pandas 3 matplotlib 3 neural-network 3 deep-neural-networks 3 numpy 3 matlab 3 medical-imaging 3 computer-vision 3 rna-seq 2 human-computer-interaction 2 time-series 2 wsi-images 2 pathology 2 image-recognition 2 histopathology 2 drug-discovery 2 radiation-therapy 2 multi-omics 2 health-informatics 2 prediction 2 graph-transformer 2 graph-neural-networks 2 drug-response-prediction 2 image-classification 2 radiation-oncology 2 immunology 2 user-interface 2 plotly 2 cv 2 seaborn 2 user-experience 2 rstats 2 driver-genes 2 tcga-data 2 user-centered-design 2 cell-biology 2 early-detection 2 mutations 2 genetics 2 lung-cancer 2 precision-medicine 2 radiomics 2 mathematical-biology 2 mathematical-modelling 2 medicine 2 metabolic-models 2 docker 2 simulation 2 analysis 2 variants 2 spatial-transcriptomics 2 cancer-simulation 2 pathogenic-variants 2 genome-scale-models 2 javascript 2 annotations 2 machinelearning-python 2 bladder-cancer 2 somatic-mutations 2 tumors 2 mutational-signatures 2 signature-extraction 2 covid-19 2 germline-variants 2