Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: spliced-alignment
PavlidisLab/rnaseq-pipeline
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
Language: Python - Size: 43.5 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 19 - Forks: 4
jguhlin/minimap2-rs
Rust bindings to minimap2 library
Language: Rust - Size: 21.4 MB - Last synced: 3 days ago - Pushed: 4 days ago - Stars: 51 - Forks: 10
lh3/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Language: C - Size: 1.82 MB - Last synced: 19 days ago - Pushed: 19 days ago - Stars: 1,698 - Forks: 391
Kuanhao-Chao/splam-analysis-results
all the scripts to reproduce the results in the splam paper
Language: Python - Size: 1.04 GB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 1 - Forks: 0
Kuanhao-Chao/splam
✂️ Deep learning-based splice site predictor that improves spliced alignments
Language: C++ - Size: 1.22 GB - Last synced: 4 days ago - Pushed: about 1 month ago - Stars: 29 - Forks: 1
sivkri/RNASeq-Analysis-JunctionSeq-QoRTs
This repository provides scripts for RNA-Seq data analysis using JunctionSeq and QoRTs, enabling quality control, differential splicing analysis, and generation of browser tracks.
Language: R - Size: 14.6 KB - Last synced: 8 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
