GitHub topics: spliced-alignment
jguhlin/minimap2-rs
Rust bindings to minimap2 library
Language: Jupyter Notebook - Size: 23 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 94 - Forks: 15
lh3/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Language: C - Size: 1.89 MB - Last synced at: 11 days ago - Pushed at: 17 days ago - Stars: 1,934 - Forks: 432
PavlidisLab/rnaseq-pipeline
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
Language: Shell - Size: 43.5 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 24 - Forks: 5
Kuanhao-Chao/splam
✂️ Deep learning-based splice site predictor that improves spliced alignments
Language: C++ - Size: 1.22 GB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 47 - Forks: 2
Kuanhao-Chao/splam-analysis-results
all the scripts to reproduce the results in the splam paper
Language: Python - Size: 1.04 GB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 1 - Forks: 0
sivkri/RNASeq-Analysis-JunctionSeq-QoRTs
This repository provides scripts for RNA-Seq data analysis using JunctionSeq and QoRTs, enabling quality control, differential splicing analysis, and generation of browser tracks.
Language: R - Size: 14.6 KB - Last synced at: about 1 month ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
