GitHub topics: vcftools
Aptivi/VisualCard
A .NET vCard parser with Android contacts2.db and MeCard support
Language: C# - Size: 5.58 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 4 - Forks: 1
davetang/learning_vcf_file
Learning the Variant Call Format
Language: Perl - Size: 42.6 MB - Last synced at: 2 days ago - Pushed at: about 1 year ago - Stars: 139 - Forks: 40
samueltuyizere/tg-contacts-to-vcf
a script that will transform telegram contacts exported in a .json format to .vcf contact cards to be shared with other contacts apps
Language: Go - Size: 1000 Bytes - Last synced at: 3 days ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
iodar/ps-vcf-merger
Simple tool to merge VCF contacts.
Language: PowerShell - Size: 2.93 KB - Last synced at: about 2 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0
everestial/VCF-Simplify
A python parser to simplify and build the VCF (Variant Call Format).
Language: Python - Size: 19.9 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 47 - Forks: 11
rutgerkirkels/vcard-generator
Vcard generator library for PHP
Language: PHP - Size: 22.5 KB - Last synced at: about 1 month ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 0
zjwinn/TASSEL-VCF-Fixer
A program for fixing TASSEL produced GBS VCFs so that they are coded reference-alternate
Language: Shell - Size: 13.7 KB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0
UofS-Pulse-Binfo/vcf_filter
Form interface so users can custom filter existing VCF files and export in a variety of formats.
Language: PHP - Size: 1.78 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
anita-brzoza/university_projects
The repository contain directories of projects done during the bioinformatics degree program
Language: HTML - Size: 894 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
jdalapicolla/LanGen_pipeline_version2
Scripts in R for Landscape Genomics Analyses v.2
Language: R - Size: 130 KB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 5 - Forks: 5
jdalapicolla/IBD_models.R
Scripts in R for analyses of Isolation by Distance (IBD) - PART 2 in LANDSCAPE GENOMICS PIPELINE
Language: R - Size: 69.3 KB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 1
BenbowLab/Benin-NGS
Example files for Benin NGS capacity building project
Language: HTML - Size: 1.36 MB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
genomoncology/using-cyvcf2
Repository for Blog Article on Parsing with cyvcf2. Article ==>
Language: Python - Size: 1.95 KB - Last synced at: about 1 month ago - Pushed at: almost 5 years ago - Stars: 7 - Forks: 1
esohkevin/gwas-tips
tips and tricks in genome-wide association studies - a tutorial
Size: 19.1 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 9 - Forks: 8
afreeorange/autozygosity
A public, web-based homozygosity mapping tool
Language: Python - Size: 3.51 MB - Last synced at: 12 months ago - Pushed at: almost 11 years ago - Stars: 1 - Forks: 1
manojbhosale/ngsUtils
Useful NGS utilities for everyday use in the form of stand-alone tool.
Language: Java - Size: 5.4 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0
jdalapicolla/MLPE.R
Scripts in R for analyses of Isolation by Resistance (IBR) - PART 3 in LANDSCAPE GENOMICS PIPELINE
Language: R - Size: 113 KB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 2
rikyiso01/Contact-Photo-eraser 📦
This app permits to remove all images from a vcf file
Language: Java - Size: 632 KB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 0
COMBAT-TB/vcf_snps_utils 📦
Custom command line utility tools to manipulate vcf files
Language: Python - Size: 12.7 MB - Last synced at: almost 2 years ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0
kalilamali/FishDNA_pipeline
Step-by-step approach in the analysis of Rainbow trout DNA from raw reads to population insights using fastqc, trimmomatic, bwa, vcftools, plink, and R.
Size: 10.6 MB - Last synced at: 12 months ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
mr-eyes/genoFreq
summarize and visualize the genotypes categories per sample in a VCF file
Language: C++ - Size: 51.8 KB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 1
M-Osky/VCFiles
VCF: Variant Call Format files are difficult to understand at first, I already had to dive into them in order to learn how to edit them, so you can use my scripts. Some of these functions already exist in vcftools, but it seems it stopped being updated. so you can use these scripts to do various tasks with them
Language: Perl - Size: 32.2 KB - Last synced at: 24 days ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
ALAPY/AGx
Variant annotation and filtration server ALAPY Genome Explorer
Language: Shell - Size: 1020 KB - Last synced at: about 2 years ago - Pushed at: almost 8 years ago - Stars: 3 - Forks: 0
rconfa/PyVCF
A python parser for vcf bioinformatics file
Language: Python - Size: 1.39 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0
Grelot/reserveBenefit--snpsdata_analysis
Codes i wrote for the paper "genomic resources for Mediterranean fishes"
Language: Shell - Size: 2.85 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
eliorav/Biology-Tools
A docker wrapper for plink
Language: Dockerfile - Size: 17.6 KB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0
superDross/pdVCF
Allows one to manipulate a VCF as a MultiIndex Pandas DataFrame
Language: Python - Size: 13.1 MB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 5 - Forks: 1
