Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: molecular-biology

jvrana/primer3-py-plus

A easy-to-use Python API for Primer3 primer design.

Language: Python - Size: 7.49 MB - Last synced: 24 days ago - Pushed: over 1 year ago - Stars: 11 - Forks: 7

mragsac/Ciona-Single-Cell-Gastrulation-Study

Analyses for "Chapter 3: Understanding Ciona intestinalis gastrulation at single-cell resolution" of Michelle Franc Ragsac's thesis dissertation

Size: 0 Bytes - Last synced: over 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

poloarol/poloarol

Computational Biologist and Machine Learning Enthusiast

Size: 12.7 KB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 0

dlesl/clonifier

A web app for viewing plasmid maps & genomes, and simulating PCR and Gibson assembly

Language: TypeScript - Size: 13.2 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 4 - Forks: 0

QCB-Collaboratory/W17.MachineLearning

Course material for the Collaboratory Workshop "Machine Learning with Python"

Language: Jupyter Notebook - Size: 15.7 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 26 - Forks: 11

rwst/wikidata-molbio

scripts I used for WD import / maintenance

Language: Python - Size: 377 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 1 - Forks: 1

tmp-production/ProteinViewer

A protein visualization system based on Unreal Engine 4.

Language: C++ - Size: 81.7 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 0

defreitasabner/moleasy

Repository with some of codes that helps me to work with DNA sequences during my PhD.

Language: Python - Size: 137 KB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

ankitamurmu/Genomics-Project

Language: R - Size: 4.24 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

V-Z/RAD-Seq-scripts

Set of scripts to process RAD-Seq HTS data on computing grids like MetaCentrum.

Language: Shell - Size: 5.14 MB - Last synced: about 1 year ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

m-jahn/R-notebook-amino-acids

Effect of amino acid supplementation on fitness in a CRISPRi library

Language: HTML - Size: 47 MB - Last synced: about 1 year ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

m-jahn/R-notebook-ralstonia-proteome

Pipelines for data analysis and visualization of the Ralstonia proteome

Language: R - Size: 120 MB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0

m-jahn/ShinyLib

R Shiny based interface for browsing fitness data from transposon or CRISPRi libraries

Language: R - Size: 91.9 MB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 3 - Forks: 0

AmitMandliya/multiple-sequence-alignment

Applying nature inspired ant colony optimization algorithm to solve the multiple sequence alignment problem in Julia language.

Language: Jupyter Notebook - Size: 854 KB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 1 - Forks: 2

backwardmachine/neodna

Translates binary sequences and DNA into turtle-like graphical information and images in the browser, using a library of functions. Javascript, HTML and IndexedDB.

Language: JavaScript - Size: 230 KB - Last synced: 4 months ago - Pushed: about 3 years ago - Stars: 1 - Forks: 0

zeritte/miRNA-target-scanner

Searching for the miRNA names in the databases, normalizing the targeting value if needed, and comparing and finding the intersection of scanned databases.

Language: Python - Size: 50.9 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 0

ph-u/agalony

semi-automated regular-unit counting using photos

Language: C - Size: 29.6 MB - Last synced: about 1 year ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

Sussex-Neuroscience/Identification-of-a-series-of-hair-cell-MET-channel-blockers

This repository contains supplemental data for the following article "Identification of a series of hair-cell MET channel blockers that protect against aminoglycoside-induced ototoxicity"

Language: HTML - Size: 1.26 MB - Last synced: about 1 year ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

gmagannaDevelop/Structurale

Cours BioInformatique Structurale II : analyse via Python

Language: Jupyter Notebook - Size: 604 KB - Last synced: about 1 year ago - Pushed: about 3 years ago - Stars: 0 - Forks: 1

LucasBN/Bioinformatics

A python tool to analyse genetic sequences

Language: Python - Size: 90.8 KB - Last synced: 12 months ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

vibbits/yasara-mmligner-plugin

Use the MMLigner structural alignment program from within Yasara!

Language: Python - Size: 38.1 KB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0

lpincus/jsmol-local Fork of bas-rustenburg/jsmol-local

An example of how to set up jsmol locally on a webpage.

Language: JavaScript - Size: 3.38 MB - Last synced: 10 months ago - Pushed: over 8 years ago - Stars: 0 - Forks: 1

cosijackson/AlgorithmsMolecularBiology

Language: Python - Size: 15.6 KB - Last synced: about 1 year ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

Related Keywords
molecular-biology 123 bioinformatics 35 python 15 computational-biology 13 dna 12 data-science 12 biology 11 r 11 synthetic-biology 10 genomics 9 machine-learning 8 data-analysis 8 protein 7 genetics 7 pipeline 7 structural-biology 6 visualization 6 ngs 6 bioinformatics-analysis 6 structural-bioinformatics 5 protein-structure 5 python3 5 pcr 5 science 5 bioinformatics-scripts 5 dna-assembly 4 population-genomics 4 artificial-intelligence 4 bioinformatics-pipeline 4 statistics 4 biochemistry 4 protein-design 4 protein-sequences 4 laboratory-automation 4 population-genetics 3 drug-discovery 3 rna 3 cloning 3 rmarkdown-document 3 image-processing 3 molecular-structures 3 high-performance-computing 3 metacentrum 3 ngs-pipeline 3 dna-sequences 3 cryo-em 3 shiny-apps 3 biotechnology 3 protein-protein-interaction 3 bioinformatics-tool 3 systems-biology 3 phylogenetics 3 proteins 3 database 3 go 3 genetic-engineering 3 sequencing 3 genbank 3 fasta 3 molecular-modeling 3 data 3 molecular-dynamics 2 chemistry 2 proteomics 2 automation 2 qpcr 2 wikidata 2 microbiology 2 research 2 sequence-analysis 2 sequence-alignment 2 phylogenetic-trees 2 evolution 2 atac-seq 2 crispr-cas9 2 bioconductor 2 notebook 2 genome-browser 2 rna-seq 2 python2 2 biological-data-analysis 2 hybseq-data 2 algorithms 2 optimization-algorithms 2 gui 2 phylogenomics 2 pathway-analysis 2 microscopy 2 r-programming 2 virology 2 deep-learning 2 space 2 linux 2 data-visualization 2 biophysics 2 synbio 2 transcriptome 2 primer-design 2 plasmids 2 golden-gate 2