galaxyproject/usegalaxy-playbook

Ansible Playbook for usegalaxy.org

Language: Shell - Size: 22.8 MB - Last synced: about 9 hours ago - Pushed: about 13 hours ago - Stars: 31 - Forks: 21

galaxyproject/bioblend

A Python library for interacting with the Galaxy API

Language: Python - Size: 16.9 MB - Last synced: 1 day ago - Pushed: 2 days ago - Stars: 84 - Forks: 113

galaxyproject/planemo

Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training materials.

Language: Python - Size: 10.1 MB - Last synced: 6 days ago - Pushed: 6 days ago - Stars: 84 - Forks: 83

galaxyproject/galaxy

Data intensive science for everyone.

Language: Python - Size: 616 MB - Last synced: 20 days ago - Pushed: 20 days ago - Stars: 1,315 - Forks: 961

BMCV/galaxy-image-analysis

Galaxy tools for image analysis

Language: Python - Size: 29.8 MB - Last synced: 15 days ago - Pushed: 15 days ago - Stars: 14 - Forks: 13

RECETOX/galaxytools

Set of Galaxy tool wrappers developed at RECETOX

Language: Python - Size: 46.4 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 12 - Forks: 12

galaxyproject/galaxy-hub

Galaxy Community Hub

Language: HTML - Size: 882 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 96 - Forks: 265

galaxyproject/tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission

Language: HTML - Size: 1.22 GB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 161 - Forks: 410

galaxyproject/iwc

Galaxy Workflows maintained by the Intergalactic Workflow Commission

Language: Python - Size: 33.4 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 23 - Forks: 50

galaxyproject/training-material

A collection of Galaxy-related training material

Language: HTML - Size: 10.4 GB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 293 - Forks: 838

galaxyproteomics/docker-galaxyp

:whale: Galaxy Docker repository with tools for proteomics (GalaxyP flavour)

Language: Dockerfile - Size: 91.8 KB - Last synced: about 1 month ago - Pushed: about 5 years ago - Stars: 7 - Forks: 5

kostrykin/galaxy-community-activities

Tool which reports and summarizes activities within a Galaxy community.

Language: Python - Size: 24.4 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 2 - Forks: 0

galaxyproject/admin-training

Galaxy Admin Training

Language: HCL - Size: 123 MB - Last synced: about 1 month ago - Pushed: 5 months ago - Stars: 60 - Forks: 62

RECETOX/MSMetaEnhancer

Tool for mass spectra metadata annotation.

Language: Python - Size: 787 KB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 8 - Forks: 8

workflow4metabolomics/w4m-docker

Docker for Workflow4Metabolomics Galaxy platform.

Language: Dockerfile - Size: 8.98 MB - Last synced: 24 days ago - Pushed: almost 5 years ago - Stars: 5 - Forks: 6

galaxy-genome-annotation/galaxy-tools

Galaxy tools for Genome Annotation

Language: Python - Size: 5.05 MB - Last synced: 29 days ago - Pushed: about 1 month ago - Stars: 4 - Forks: 12

workflow4metabolomics/tools-metabolomics

Galaxy tools for metabolomics maintained by Workflow4Metabolomics

Language: R - Size: 1.31 GB - Last synced: 24 days ago - Pushed: about 1 month ago - Stars: 23 - Forks: 22

workflow4metabolomics/camera.archive 📦

🚫 move to https://github.com/workflow4metabolomics/tools-metabolomics

Language: R - Size: 94.7 MB - Last synced: 24 days ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 1

workflow4metabolomics/workflow4metabolomics

Workflow4Metabolomics meta repository

Language: HTML - Size: 12.5 MB - Last synced: 24 days ago - Pushed: over 2 years ago - Stars: 10 - Forks: 4

galaxyproject/planemo-machine

A packer.io configuration for building out Galaxy (http://galaxyproject.org/) tool development environments.

Language: HTML - Size: 246 KB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 10 - Forks: 16

C3BI-pasteur-fr/ngphylogeny-django

Language: HTML - Size: 6.86 MB - Last synced: 28 days ago - Pushed: about 1 year ago - Stars: 27 - Forks: 22

galaxyproject/SARS-CoV-2 📦

Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures

Language: Jupyter Notebook - Size: 514 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 128 - Forks: 78

usegalaxy-eu/vgcn

Virtual Galaxy Compute Nodes (vgcn)

Language: Python - Size: 49.6 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 6 - Forks: 10

IFB-ElixirFr/GFLS_BIOS4BIOL

Galaxy For Life Science - BIOS4BIOL

Language: R - Size: 834 KB - Last synced: 7 months ago - Pushed: over 6 years ago - Stars: 1 - Forks: 0

IFB-ElixirFr/GFLS_SNiPlay

Galaxy For Life Science - SNiPlay

Language: C++ - Size: 57.7 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0

galaxyproject/tools-devteam

Contains a set of Galaxy Tools mostly written by the Galaxy Team.

Language: Python - Size: 57.5 MB - Last synced: about 1 month ago - Pushed: 2 months ago - Stars: 37 - Forks: 92

hexylena/argparse2tool

transparently build CWL and Galaxy XML tool definitions for any script that uses argparse

Language: Python - Size: 271 KB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 26 - Forks: 9

Public-Health-Bioinformatics/galaxy_tools

Language: Python - Size: 1.6 MB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 1

sebastianalamina/GC_2023-2

Trabajos presentados como parte del curso de Genómica Computacional, impartido por el profesor Sergio Hernández López durante el semestre 2023-2 en la Facultad de Ciencias, UNAM.

Language: Jupyter Notebook - Size: 21.2 MB - Last synced: 9 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

usegalaxy-eu/ena-cog-uk-wfs

Collection of scripts for automated SARS-CoV-2 genome surveillance.

Language: Python - Size: 302 KB - Last synced: about 1 month ago - Pushed: 8 months ago - Stars: 21 - Forks: 7

fredericlemoine/golaxy

golaxy : interacting with Galaxy in Go

Language: Go - Size: 65.4 KB - Last synced: 10 months ago - Pushed: about 1 year ago - Stars: 5 - Forks: 0

NordicESMhub/galaxy-tools

Galaxy Tools maintained by NordicESMHub

Language: Python - Size: 20.5 MB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 8 - Forks: 6

RECETOX/workflow-testing

Contains RECETOX workflows with automated tests against our instance at https://umsa.cerit-sc.cz/

Size: 12.8 MB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 2 - Forks: 4

galaxy-genome-annotation/galaxy-circos-tool 📦

DEPRECATED: Merged into https://github.com/galaxyproject/tools-iuc/

Language: Python - Size: 22.4 MB - Last synced: about 1 month ago - Pushed: over 5 years ago - Stars: 6 - Forks: 2

galaxyproject/galaxy-lib 📦

Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.

Language: Python - Size: 1.21 MB - Last synced: about 1 month ago - Pushed: almost 4 years ago - Stars: 12 - Forks: 19

usegalaxy-eu/operations

usegalaxy.eu operations

Size: 1.11 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 4 - Forks: 8

usegalaxy-eu/sars-cov-2-processing-requests

Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.

Language: Python - Size: 1.55 MB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 17 - Forks: 8

galaxyproject/cloudman

Easily create and manage compute clusters on any Cloud.

Language: Python - Size: 25 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 37 - Forks: 23

C3BI-pasteur-fr/ngphylogeny-galaxy

Galaxy tools and workflows used in NGPhylogeny.fr

Language: HTML - Size: 15.2 MB - Last synced: 28 days ago - Pushed: about 3 years ago - Stars: 4 - Forks: 3

RECETOX/workflow-reports

Size: 8.79 KB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 0 - Forks: 3

galaxyproject/starforge

Build Galaxy dependencies, wheels, and other things, in Docker (and other things)

Language: Python - Size: 3.22 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 8 - Forks: 16

shiltemann/phinch-galaxy-ie

Language: HTML - Size: 1.82 MB - Last synced: about 1 month ago - Pushed: over 8 years ago - Stars: 2 - Forks: 0

galaxy-genome-annotation/docker-galaxy-genome-annotation

:whale: Galaxy Docker Image with Tools for Genome Annotation

Language: Dockerfile - Size: 109 KB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 11 - Forks: 8

hexylena/gx-cookie-proxy

Convert galaxysession cookies into REMOTE_USER

Language: Go - Size: 153 KB - Last synced: about 1 month ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 3

hexylena/galaxy-workflow-status

See the status of many simultaneous invocations of a single Galaxy Workflow

Language: JavaScript - Size: 814 KB - Last synced: about 1 month ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

shiltemann/ethercalc-galaxy-ie

Galaxy Interactive Environment for the Ethercalc spreadsheet application

Language: HTML - Size: 65.4 KB - Last synced: about 1 month ago - Pushed: about 7 years ago - Stars: 0 - Forks: 2

workflow4metabolomics/probmetab

ProbMetab For Galaxy

Language: R - Size: 14.1 MB - Last synced: 24 days ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0