GitHub topics: omics-data
open-prophetdb/prophetdb.org
A website for OpenProphetDB community.
Size: 14 MB - Last synced at: about 18 hours ago - Pushed at: about 18 hours ago - Stars: 0 - Forks: 1
bigomics/plaid
Plaid is an ultra-fast method to compute single-sample enrichment scores for gene expression or proteomics data
Language: R - Size: 674 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 1 - Forks: 0
m-jahn/fluctuator
R package to Import and Modify SVG (XML) Graphic Files
Language: R - Size: 3.33 MB - Last synced at: 14 days ago - Pushed at: 8 months ago - Stars: 24 - Forks: 2
BiomedSciAI/Geno4SD
An python omics data toolkit for the analysis across biological scales
Language: Jupyter Notebook - Size: 78.1 MB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 11 - Forks: 1
NIGMS/Consensus-Pathway-Analysis-in-the-Cloud
Consensus pathway analysis module developed by the University of Nevada at Reno
Language: HTML - Size: 54.1 MB - Last synced at: 27 days ago - Pushed at: 27 days ago - Stars: 2 - Forks: 3
cafferychen777/MicrobiomeStat-Turtorial-Professional-Version
MicrobiomeStat Tutorial Repository: This is a comprehensive resource for learning how to use the MicrobiomeStat package. It provides a step-by-step guide to effectively analyze complex microbiome data.
Size: 178 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 2
viktormiok/tigaRcycle
An R package for utilities to guide in-depth detection of circadian signals from omics time series data
Language: Jupyter Notebook - Size: 3.92 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 2 - Forks: 1
zhangxiaoyu11/OmiTrans
The first GANs-based omics-to-omics translation framework
Language: Python - Size: 9.86 MB - Last synced at: about 2 months ago - Pushed at: almost 2 years ago - Stars: 12 - Forks: 5
kris96tian/simulator_app_multi_omics
Simulate and download multi-omics datasets, by selecting omics types, sample sizes, and other parameters.
Language: Python - Size: 4.88 KB - Last synced at: about 2 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
smortezah/phd
My PhD thesis
Language: R - Size: 15 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
saramasarone/enrich_omics
A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)
Language: Python - Size: 3.19 MB - Last synced at: 2 months ago - Pushed at: 7 months ago - Stars: 19 - Forks: 0
ocbe-uio/psbcSpeedUp
Penalized Semiparametric Bayesian Cox Models
Language: C++ - Size: 789 KB - Last synced at: about 1 month ago - Pushed at: 12 months ago - Stars: 3 - Forks: 1
babessell1/MADRID Fork of HelikarLab/COMO
Metabolic Drug Repurposing Pipeline
Language: Python - Size: 733 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 0
leaxsd/primer-genomics
A reproduction of the primer tutorial in deep learning genomics proposed in Nature Genetics (2018) in Pytorch.
Language: Jupyter Notebook - Size: 323 KB - Last synced at: about 1 year ago - Pushed at: about 5 years ago - Stars: 5 - Forks: 0
agniRS/spatial-RNA-seq
spatial RNA-seq analysis in Glioblastoma using Python
Language: Jupyter Notebook - Size: 16.1 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
upcmarina/glioma_omics
RNA-seq analysis of glioma combination drug therapies
Language: HTML - Size: 3.46 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0
