jumphone/BEER

BEER: Batch EffEct Remover for single-cell data

Language: R - Size: 60.1 MB - Last synced at: 21 days ago - Pushed at: 3 months ago - Stars: 24 - Forks: 9

theislab/scarches

Reference mapping for single-cell genomics

Language: Jupyter Notebook - Size: 825 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 347 - Forks: 52

saeyslab/multinichenetr

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data

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martabica/breast-cancer-atlas-metadata-curation

This repository is dedicated to curating, organizing, and annotating metadata for scRNA-seq datasets of human breast cancer, with a focus on datasets that include myeloid cells. This work is tied to the Mye-InfoBank project, aiming to enhance data integration, analysis, and reproducibility in breast cancer

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martabica/MCT-poster-MBICA-2023

This repository contains text files with information and links corresponding to QR codes featured in my poster. Each QR code directs viewers to detailed content, references, or supplementary materials related to the topics covered in the poster.

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amkhasawneh/covid-19-scRNA-seq

scRNA-seq for COVID-19 samples, with healthy controls.

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aristoteleo/dynamo-release

Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

Language: Python - Size: 25.4 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 430 - Forks: 59

theislab/scib-reproducibility

Additional code and analysis from the single-cell integration benchmarking project

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aristoteleo/dynast-release

Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments

Language: Python - Size: 81.4 MB - Last synced at: 13 days ago - Pushed at: over 1 year ago - Stars: 17 - Forks: 6

PrachTecha/scTCIpy

A package for calculating the cell transition indices to identify the transitioning cells using stochastic differential equations (SDEs).

Language: Jupyter Notebook - Size: 4.21 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

floresbius/single_cell_rna_sequencing

Workflows for sc/snRNAseq from count data.

Language: R - Size: 1000 Bytes - Last synced at: 3 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

csbg/neuroblastoma

Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis

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Matrisome/MatriCom

MatriCom: matrisome communications in single-cell RNA-seq datasets

Language: R - Size: 5.92 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

OceanGenomics/mudskipper

A tool for projecting genomic alignments to transcriptomic coordinates

Language: Rust - Size: 18.3 MB - Last synced at: 10 days ago - Pushed at: 11 months ago - Stars: 35 - Forks: 8

GCS-ZHN/socube

A simple python package for doublet detection in scRNA-seq data

Language: Python - Size: 4.37 MB - Last synced at: 2 days ago - Pushed at: about 2 years ago - Stars: 10 - Forks: 5

cbg-ethz/scDEF

Deep exponential families for single-cell data.

Language: Python - Size: 35 MB - Last synced at: 24 days ago - Pushed at: 5 months ago - Stars: 21 - Forks: 1

slowkow/cellguide

🧭 Navigate single-cell RNA-seq datasets in your web browser.

Language: JavaScript - Size: 4.01 MB - Last synced at: 10 days ago - Pushed at: almost 2 years ago - Stars: 28 - Forks: 4

spginebaugh/muscle-aging-ml

Investigating aging in snRNA-seq skeletal muscle data with Factor Analysis

Language: R - Size: 4.66 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

LieberInstitute/TREG

Tools for finding Total RNA Expression Genes in single nucleus RNA-seq data

Language: R - Size: 24.1 MB - Last synced at: 5 days ago - Pushed at: 4 months ago - Stars: 4 - Forks: 2

rnacentre/WDL_Tools

WDL workflow language program, developed for singlecell rna sequencing data analysis, maintained by @OOAAHH(SunHao) .

Language: WDL - Size: 78.5 MB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 2 - Forks: 1

Perik-Zavodskii/ErythroOrigin

Predict human Erythroid cell tissue of origin using the BD Rhapsody single cell Immune responce panel gene expression data

Language: Jupyter Notebook - Size: 69.4 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

ZJUFanLab/bulk2space

a spatial deconvolution method based on deep learning frameworks, which converts bulk transcriptomes into spatially resolved single-cell expression profiles

Language: Jupyter Notebook - Size: 12.1 MB - Last synced at: 4 months ago - Pushed at: about 2 years ago - Stars: 115 - Forks: 23

molgenis/STEMI-scRNA-seq

single cell experiments in STEMI participants

Language: R - Size: 798 KB - Last synced at: about 2 months ago - Pushed at: 5 months ago - Stars: 1 - Forks: 0

potulabe/symphonypy

Port of symphony algorithm of single-cell reference atlas mapping to Python

Language: Jupyter Notebook - Size: 83.3 MB - Last synced at: about 1 month ago - Pushed at: 5 months ago - Stars: 28 - Forks: 1

theislab/atlas-feature-selection-benchmark

Code for "Feature selection methods affect the performance of scRNA-seq data integration and querying"

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obenno/StarScope

ThunderBio scRNA-seq pipeline

Language: Shell - Size: 85 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

brickmanlab/cat-python

Cluster Alignment Tool (CAT)

Language: Python - Size: 4.36 MB - Last synced at: 14 days ago - Pushed at: 7 months ago - Stars: 1 - Forks: 0

chenyongrowan/scTIGER

The Single-cell Temporal Inference of Gene Regulatory (scTIGER) Networks method is a computational method designed to predict gene regulatory networks (GRNs) using paired datasets of case versus control experiments.

Language: Python - Size: 17.6 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 1 - Forks: 1

ncrna/PathogenTrack

A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.

Language: Python - Size: 59.5 MB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 27 - Forks: 8

jiang-junyao/IReNA

R package IReNA

Language: R - Size: 150 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 26 - Forks: 12

wheaton5/souporcell

Clustering scRNAseq by genotypes

Language: Python - Size: 1.66 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 168 - Forks: 46

XingyanLiu/CAME

Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.

Language: Python - Size: 58.2 MB - Last synced at: 5 days ago - Pushed at: about 1 year ago - Stars: 12 - Forks: 6

chenyongrowan/DEGage

DEGage is a novel model-based method for gene differential expression analysis between two groups of scRNA-seq count data. It employs a novel family of discrete distributions for describing the difference of two NB distributions (named DOTNB).

Language: R - Size: 5.35 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 1

HelenaLC/simulation-comparison

Snakemake workflow to benchmark scRNA-seq data simulators

Language: R - Size: 505 KB - Last synced at: 19 days ago - Pushed at: over 2 years ago - Stars: 13 - Forks: 3

carpentries-incubator/scrna-seq-analysis

Single-cell RNA Sequencing Data Analysis

Language: Python - Size: 36.3 MB - Last synced at: 20 days ago - Pushed at: 6 months ago - Stars: 2 - Forks: 7

PMBio/mudatasets

Multimodal datasets, in MuData format

Language: Python - Size: 66.4 KB - Last synced at: 5 days ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 1

bioFAM/mofax

Work with trained factor models in Python

Language: Jupyter Notebook - Size: 48.4 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 27 - Forks: 12

guachinwey/Analysis-of-scRNA-seq-samples-for-prostate-tumour-tissue-at-different-stages-of-the-cell-cycle

Language: R - Size: 43.9 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

NKI-CCB/sobolev_alignment

Sobolev alignment of deep probabilistic models for comparing single cell profiles

Language: Python - Size: 3.61 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 5 - Forks: 2

shiquan/PISA

A collection of tools to process single-cell omics datasets.

Language: C - Size: 6.33 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 39 - Forks: 8

saeyslab/ViScore

Single-cell dimensionality reduction evaluation and benchmarking toolkit

Language: Python - Size: 7.98 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 4 - Forks: 0

jaleesr/BITFAM

BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequencing data. Please see Gao S et al., Genome Research (2021) https://genome.cshlp.org/content/31/7/1296 for details.

Language: R - Size: 61.6 MB - Last synced at: 30 days ago - Pushed at: about 2 years ago - Stars: 31 - Forks: 17

chengfgao/TopicVelo

TopicVelo: Dissection and Integration of Bursty Transcriptional Dynamics for Complex Systems

Language: Jupyter Notebook - Size: 9.08 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 19 - Forks: 2

mouzkolit/NeuroBeginner

Data Science Beginner Course teached Jan 23

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changebio/scDenorm

scDenorm: a denormalization tool for single-cell transcriptomics data

Language: Jupyter Notebook - Size: 57.1 MB - Last synced at: 21 days ago - Pushed at: 7 months ago - Stars: 2 - Forks: 1

hemberg-lab/scRNA.seq.course Fork of rstudio/bookdown-demo

Analysis of single cell RNA-seq data course

Language: TeX - Size: 365 MB - Last synced at: 5 months ago - Pushed at: about 3 years ago - Stars: 672 - Forks: 360

mjoppich/PICASO

Profiling Integrative Communities of Aggregated Single-cell Omics data

Language: Jupyter Notebook - Size: 337 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 0 - Forks: 0

LamineTourelab/Tutorial

Tutorials on machine learning, artificial intelligence in general and in biomedical research.

Language: Jupyter Notebook - Size: 70.3 MB - Last synced at: 6 months ago - Pushed at: 12 months ago - Stars: 12 - Forks: 0

matviimykhailichenko/HiVaGe

A utility designed to assess the performance of various tools in detecting highly variable genes in scRNAseq data

Language: R - Size: 34.5 MB - Last synced at: 5 months ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

ma-compbio/GAGE-seq

Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq

Language: Jupyter Notebook - Size: 17.4 MB - Last synced at: 6 months ago - Pushed at: about 1 year ago - Stars: 11 - Forks: 0

alexadodu/Analisis_scRNA-seq_endometriosis_terapia_hormonal

Analysis of Single-Cell RNA-seq Data to Evaluate the Efficacy of Hormonal Therapy in the Treatment of Endometriosis-Related Pain

Language: R - Size: 30.4 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

YosefLab/compassR

An R library for conducting analyses on COMPASS data.

Language: R - Size: 50.2 MB - Last synced at: 7 months ago - Pushed at: almost 4 years ago - Stars: 12 - Forks: 9

Oshlack/scRNAtools-paper

A review of tools for analysing single-cell RNA-seq data

Language: TeX - Size: 1.93 MB - Last synced at: 5 months ago - Pushed at: almost 7 years ago - Stars: 6 - Forks: 3

whyang15/F1L-scRNA-seq

This is part of the Figure 1 Lab (F1L) internship emulator where we dive into the Kinker paper (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8135089/) to recreate the first figure.

Language: Jupyter Notebook - Size: 3.83 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

lingfeiwang/normalisr

Causal inference, differential expression, and co-expression for scRNA-seq

Language: Python - Size: 24.5 MB - Last synced at: 30 days ago - Pushed at: over 3 years ago - Stars: 18 - Forks: 3

vandijklab/cell2sentence-ft

Cell2Sentence turns scRNA-seq data into text for LLM training.

Language: Python - Size: 229 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 81 - Forks: 13

igordot/clustermole

Unbiased single-cell transcriptomic data cell type identification

Language: R - Size: 17.8 MB - Last synced at: 12 days ago - Pushed at: 12 months ago - Stars: 13 - Forks: 0

liviuspenter/ONT-lineage-tracing

Analyses of Penter, Borji & Nagler et al., Nature Communications 2024

Language: R - Size: 60.4 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

limix/CellRegMap

CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq

Language: Python - Size: 11.2 MB - Last synced at: 15 days ago - Pushed at: 8 months ago - Stars: 21 - Forks: 3

Perik-Zavodskii/2ndDerivativeFeatures

Second Derivative-based selection of VariableFeatures

Language: Jupyter Notebook - Size: 19.3 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

carlescn/scRNAseq-tools

This is a set of bash wrapper scripts for STAR that simplify it's setup and use with a set of pre-defined parameters.

Language: Shell - Size: 91.8 KB - Last synced at: 2 months ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

inesmarais/scRNA-seq-analysis-cornea

Scripts for analysis of transcriptomic data of the developing cornea

Language: Jupyter Notebook - Size: 21.7 MB - Last synced at: 9 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

immunogenomics/harmony

Fast, sensitive and accurate integration of single-cell data with Harmony

Language: R - Size: 51.7 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 475 - Forks: 127

COMBINE-lab/salmon

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

Language: C++ - Size: 209 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 725 - Forks: 156

Zhuang-Bio/scRNA_STseq_human_wounds_paper_scripts

Comprehensive analysis of single cell RNAseq and spatial transcriptomics in human acute and chronic wounds

Language: Jupyter Notebook - Size: 379 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

ocbe-uio/DIscBIO

A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics

Language: Jupyter Notebook - Size: 230 MB - Last synced at: 2 days ago - Pushed at: over 1 year ago - Stars: 12 - Forks: 5

theislab/cellrank_reproducibility_preprint

Code to reproduce results from the CellRank preprint

Language: Jupyter Notebook - Size: 228 MB - Last synced at: 4 months ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 0

umangv/picturedrocks

PicturedRocks Single Cell Analysis Tool

Language: Python - Size: 383 KB - Last synced at: 4 months ago - Pushed at: over 4 years ago - Stars: 5 - Forks: 0

zhewa/scruff Fork of campbio/scruff

Single Cell RNA-seq UMI Filtering Facilitator

Language: R - Size: 31.3 MB - Last synced at: 6 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0

Honchkrow/Deconer

Deconer: A Comprehensive and Systematic Cell Type Deconvolution Evaluator

Language: R - Size: 69.5 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

czbiohub-sf/cerebra 📦

A tool for fast and accurate summarizing of variant calling format (VCF) files

Language: Python - Size: 164 MB - Last synced at: 1 day ago - Pushed at: over 2 years ago - Stars: 60 - Forks: 9

mode1990/GEX-analysis-scMultiomics

Multiomics Pipeline by Mo De for FOUNDIN-1c: RNA Analysis Only

Language: R - Size: 18.6 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

bodegalab/irescue

A tool to quantify transposable elements expression in scRNA-seq

Language: Python - Size: 16.7 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 7 - Forks: 1

single-cell-genetics/singlecell_neuroseq_paper

Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation

Language: Jupyter Notebook - Size: 39.4 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 20 - Forks: 6

single-cell-genetics/singlecell_endodiff_paper

Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression

Language: Jupyter Notebook - Size: 43.5 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 15 - Forks: 6

Lindell-Lab/MODS-Subphenotypes

Repository for MODS subphenotype preprint, data, and code.

Size: 12.9 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

zhanghao-njmu/SCP

An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

Language: R - Size: 788 MB - Last synced at: 10 months ago - Pushed at: 11 months ago - Stars: 315 - Forks: 66

klarman-cell-observatory/scPlot

Single cell interactive plotting tools

Language: Jupyter Notebook - Size: 37.9 MB - Last synced at: 17 days ago - Pushed at: almost 5 years ago - Stars: 23 - Forks: 8

WXlab-NJMU/scrna-recom

collected resource for scRNA-seq analysis

Language: R - Size: 88.5 MB - Last synced at: 10 months ago - Pushed at: almost 2 years ago - Stars: 49 - Forks: 14

safabio/modplots

Collection of customised plotting functions.

Language: R - Size: 567 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

semraulab/phiclust

A clusterability measure for scRNA-seq data.

Language: R - Size: 140 MB - Last synced at: 11 months ago - Pushed at: about 3 years ago - Stars: 14 - Forks: 3

ToryDeng/scCTS

scCTS: identifying the cell type specific marker genes from population-level single-cell RNA-seq

Language: R - Size: 11.9 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

maxsonBraunLab/CITEViz

CITEViz: Replicating the Interactive Flow Cytometry Workflow in CITE-Seq

Language: R - Size: 83.3 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 6 - Forks: 5

ismms-himc/visium-clustergrammer2

Spatial Transcriptomics Dashboard

Language: Jupyter Notebook - Size: 29 MB - Last synced at: 18 days ago - Pushed at: almost 2 years ago - Stars: 28 - Forks: 5

MYousry2002/scHAMR

scHAMR adapts the High Throughput Annotations of Modified Ribonucleotides (HAMR) pipeline to single-cell resolution

Language: Jupyter Notebook - Size: 159 MB - Last synced at: 11 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

OOAAHH/SRA_Analysis_WDL

用于bioos的大规模数据分析

Language: WDL - Size: 243 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0

bcgsc/RNA-Scoop

:shipit: interactive visualization of single-cell transcriptomes

Language: Java - Size: 298 MB - Last synced at: 4 days ago - Pushed at: over 1 year ago - Stars: 11 - Forks: 4

nunofonseca/fastq_utils

Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.

Language: C - Size: 82 MB - Last synced at: 5 months ago - Pushed at: 9 months ago - Stars: 34 - Forks: 15

mjoppich/cPred

Predict the celltype of a cluster from Seurat FindMarker data

Language: Python - Size: 1.01 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0

zerostwo/scRNA_tutorial

scRNA-seq analysis pipeline.

Language: R - Size: 10.7 KB - Last synced at: 12 months ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

WT215/bayNormJL.jl

bayNorm in Julia.

Language: Julia - Size: 17.6 KB - Last synced at: 12 months ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 0

theislab/scPoli_legacy

scPoli legacy code for reproducibility

Language: Python - Size: 112 MB - Last synced at: 4 months ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0

pathint/RankCompV3.jl

RankCompV3: a differential expression analysis algorithm based on the relative expression orderings (REOs) of gene pairs

Language: Julia - Size: 9.39 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 5 - Forks: 0

fabilab/northstar

Single cell type annotation guided by cell atlases, with freedom to be queer

Language: Python - Size: 304 KB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 25 - Forks: 6

rezakj/iCellR

Single (i) Cell R package (iCellR) is an interactive R package to work with high-throughput single cell sequencing technologies (i.e scRNA-seq, scVDJ-seq, scATAC-seq, CITE-Seq and Spatial Transcriptomics (ST)).

Language: R - Size: 68.2 MB - Last synced at: 12 months ago - Pushed at: about 1 year ago - Stars: 117 - Forks: 19

AlexUOM/Sinus-node-deconvolution

Code used for the deconvoluting right atrium and sinus node bulk RNA-Seq into scRNA-Seq

Language: Jupyter Notebook - Size: 398 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

kharchenkolab/conos

R package for the joint analysis of multiple single-cell RNA-seq datasets

Language: R - Size: 269 MB - Last synced at: 11 months ago - Pushed at: about 1 year ago - Stars: 188 - Forks: 38

ZJUFanLab/scSpace

an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial transcriptome references

Language: HTML - Size: 29.6 MB - Last synced at: 10 months ago - Pushed at: almost 2 years ago - Stars: 19 - Forks: 3

ethanmclark1/bioinformatics-sota-eval

Evaluating SOTA biologically-informed neural networks (KPNN, PGNN, and GNN) on scRNA-seq data for classification tasks

Language: Python - Size: 89.9 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

ismms-himc/clustergrammer2-notebooks

Examples using Clustergrammer2 to explore high-dimensional datasets.

Language: Jupyter Notebook - Size: 463 MB - Last synced at: 18 days ago - Pushed at: over 4 years ago - Stars: 40 - Forks: 11